YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE18316

General Information:
Name(s) found: CE18316 [WormBase]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • WBGene00020953 status:Partially_confirmed UniProt:O61900 protein_id:CCD74271.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 345 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWTFNRSTAE APTMPSSSNT VGGNIYFLEE EYRKKRFRQN SKCIFKIFSS NYQVRLLFSS  60
   61 FAVKNRLFFV KKSLKMADND RKRKHNRWNQ KVKQKSVEAG VTGLFFSCEG HEKQALQEAY 120
  121 SIIDELLEDP ANGISLKAPE AAPQGSEAPG NPAEAEDSDE DIADALKKAC DDQRQPKPGN 180
  181 FVKKERRCIQ RPTGVKNCIF VSVKNANIQL LAEKMVELTQ KAPRCRFLQR VYPVEHTLAV 240
  241 DLSKMNEVLM KVISDTLKAD GTGKLPTYSV EFKARNNDSV AKNSVLQMVD DAVCALAPTA 300
  301 RVSLNHADVT FFVQVSRTTI MVGVCRQFYD RRKYSLRATP AAAAT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] MSA 1.055994 View MSA. No confident structure predictions are available.
    2 View Details [156..345] PSI-BLAST 19.39794 Crystal structure of Bacillus anthracis ThiI, a tRNA-modifying enzyme containing the predicted RNA-binding THUMP domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle