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Protein Overview: CE17217

General Information:
Name(s) found: CE17217 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00020296 Ribosomal RNA-processing protein 8 status:Confirmed UniProt:O44410 protein_id:CCD73979.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 343 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: positive regulation of growth rate [IMPLink to PubMed article]
    metabolic process [IEALink to PubMed article]
    Molecular Function: methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKRKITDE KDAQHVPAEK REKVENWLKK STEKPTSSQS DAEKKKKRPW RNKVRKLAAK  60
   61 KAAADKKSEN PEEPPLILEP KSSSDENTKK KRKRGPKKKK FKPEVAGKAA ETENDDVAAA 120
  121 PEEADPIAEA KKRLDAGRFR FLNEKLYTCT GSEAFDFFKE DPTAFDLYHK GFADQVKKWP 180
  181 NHPLREIIRW LQSKPDQQSV FDLGCGEAKI AEAVGEKHKI RSFDLVAVND RVESCDMSKL 240
  241 PAEDSSADIV IYCLSLMGTN LYDFIREARR VLKIGGILKI AEVTSRFVSI KQFCEAITKM 300
  301 GFEQSHRREL TDYFMMMEFK KVEKVEQKRP YGLKLKPCLY KKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] MSA 2.089996 View MSA. No confident structure predictions are available.
    2 View Details [127..343] PSI-BLAST 9.522879 CmaA1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transferase activity
    		•  0.769739415230943 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.0326231616309937 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle