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Protein Overview: CE17060

General Information:
Name(s) found: CE17060 [WormBase]
Description(s) found:
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  • WBGene00018329 locus:fbxa-130 status:Predicted TR:O44488 protein_id:AAB92053.1 [WormBase]
  • pir||T32621 hypothetical protein F42A6.8 - Caenorhabditis elegans [NCBI NR]
  • gi|2702431|gb|AAB92053.1| Hypothetical protein F42A6.8 [Caenorhabditis elegans] [NCBI NR]
  • gi|17540364|ref|NP_500327.1| F-box A protein family member (fbxa-130) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE17060 WBGene00018329 status:Predicted TR:O44488 protein_id:AAB92053.1 [wormpep150.fasta]
  • 17060 WBGene00018329 status:Predicted TR:O44488 protein_id:AAB92053.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative cytoplasmic protein family member (4E104) [Caenorhabditis elegans]gi|2702431|gb|AAB92053.1| Hypothetical protein F42A6.8 [Caenorhabditis elegans]gi|7503223|pir||T32621 hypothetical protein F42A6.8 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:O44488 protein_id:AAB92053.1 [wormpep115.fasta.reversed]
  • CE17060 status:Predicted TR:O44488 protein_id:AAB92053.1 [wormpep80.hongbin]
  • CE17060 WBGene00018329 locus:fbxa-130 status:Predicted UniProt:O44488_CAEEL protein_id:AAB92053.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE17060 WBGene00018329 locus:fbxa-130 status:Predicted UniProt:O44488_CAEEL protein_id:AAB92053.1| [wormORF-contam.fasta]
  • CE17060 WBGene00018329 locus:fbxa-130 status:Predicted TR:O44488 protein_id:AAB92053.1 [wormpep160-contam.fasta]
  • Hypothetical protein F42A6.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F-box A protein family member (fbxa-130) [Caenorhabditis elegans] [nr-271106-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 331 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: defecation [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQISGTWARS SRFEGWETAL PCERGNCQAW SMILIGFVRR PTSKNGCYNC KFNHKSFLII  60
   61 PEFLFRPKPE KSYSYSVVQE IVSCIIVARH VSPLFRQTID LMDPGIEKIH LLSSASPYFD 120
  121 NTYGLVGLSG KENMQSVDDC FKAMNLPHAK VLEVTGIDFV DNISMVKYFR PGYLEKIRMY 180
  181 SCYCSASQEM SEEIANLEQW KQAKHFLCIG GRMNIPIQRF FHFDQFSIGL QTLSIDDAVQ 240
  241 IRDILLRSPS FESATIDVQL LEKEAIENVF TPNHLLIYRG REFRPVGTDS SFVINITKNK 300
  301 LEIHKHKGAN PPRRRDERPI HERIRQRQDG W

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] MSA 2.302996 View MSA. No confident structure predictions are available.
    2 View Details [103..331] Pfam 49.267606 No description for PF01827.18 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle