YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE16643

General Information:
Name(s) found: CE16643 [WormBase]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • WBGene00012885 status:Confirmed UniProt:O45948 protein_id:CAA16379.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 153 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    iron-sulfur cluster assembly [IEALink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    iron-sulfur cluster binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLQISSAAK TLLHKFALPA ATSVAQYHEK VIDHYENPRN VGSLDKNDPS VGTGIVGAPA  60
   61 CGDVMKLQIR VDDNGKIIEA KFKTFGCGSA IASSSLATEW INGKTIDYAS KIKNDEIAKE 120
  121 LCLPPVKLHC SMLAQDAIQA ALKDYQKKQT KKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] PSI-BLAST 52.0 Solution NMR Structure of The Haemophilus Influenzae Iron-Sulfur Cluster Assembly Protein U (IscU) with Zinc Bound at the Active Site. Northeast Structural Genomics Consortium Target IR24. This protein is not apo, it is a model without zinc binding constr

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.4500214796709 bayes_pls_golite062009
  • protein binding
    		•  0.380604392484225 bayes_pls_golite062009
  • catalytic activity
    		•  0.256292883613773 bayes_pls_golite062009
  • 2 iron, 2 sulfur cluster binding
    		•  0.0439466134407704 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle