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Protein Overview: CE16301

General Information:
Name(s) found: CE16301 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00011054 locus:arrd-13 status:Partially_confirmed UniProt:O17982 protein_id:CAB05787.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 460 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPETELHVIF DQPNEVFFPG QPISGRVVLS TTKEKYKARA VNIKILGLAH TSWTDYESVR  60
   61 RVDADGKVSH HRQSVHYSAN VNYLDYTLLL WACKDGSNEL AAGEYAWSFS YNLPLNVPPS 120
  121 FEGKYGYLRY SVTAEVDRPW RLDKAKKRCI TVSPLIDLNV IPHALTQIND QASENLGCCC 180
  181 FKKGYLELRV NIPKTGFVPG ETVPMNIHIL NHSSVPVTEV KAKIIQQCKF IAYRNGTTFH 240
  241 YGGGYETGMS GQLQETKHDT KTVVKHGQEM TVAPRNEHKF AMELRLPSVT PTINQFSPVI 300
  301 TVEYIVQFHV ETSSTFGSDV DCEMGILIGT VPIRQFLPPA YYPQDPNLPQ ILPTPIGGGV 360
  361 VAPPPGYGFL PMADGSEKGA GDASYPAASM PMYPIPNVPY PSKDDGTVVI PSAPPLSYEE 420
  421 SMFGQDGTEL NTDENEQPFA PKYPVFNNLP VYNPTAPPPE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..359] PSI-BLAST 73.09691 Arrestin
    2 View Details [360..460] FFAS03 0.981 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.31731162588602 bayes_pls_golite062009
  • protein binding
    		•  1.27021881529494 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle