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Protein Overview: lin-66

General Information:
Name(s) found: lin-66 / CE15557 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00001562 locus:lin-66 status:Confirmed UniProt:O62020 protein_id:CAB05113.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 627 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: hermaphrodite genitalia development [IMP]
    locomotion [IMP]
    nematode larval development [IMP]
    reproduction [IMP]
    positive regulation of locomotion [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYEMNSLFS SNQQPLGGGP PPQQQSQQQQ QPPQSLWSLQ QFSQMGAPDN FGNHAVPFMP  60
   61 TLGMLNQYQN PHPLQMVPPQ PLVTPSQVLP PSMAEQQRAD TIHGFGVLTW LSAKAGLITC 120
  121 KDKMIISFQL KDFCDQMLND LTSVLRVGFT LSFHAALNET SEYTATIVSP IYGPDADVLF 180
  181 ANSQEVDLEA ANPTPPNSKD AYSPALEQKA IPALLAIFQR HGLQQIQLSR SFSLHSQMSN 240
  241 CGDDELFRYV GTSSLKRRQF VERRTHLFRL QNDDSIILQY PAVYQAVYQL ASYLLRRGGA 300
  301 TSIQSLFDYY GSPDIMPEVR SHTGEGRQDF LNLLTAHNWV FALFPNRTYV SVRRNLPNYD 360
  361 YVGFIKQHFQ EMDITRSQQM AYGQPPRGIQ RTMSAQMGSS FATGRPQNLL MQHQHAMTPA 420
  421 ATRSGSLWDS QSSLSQSGNS GDQWSPLFSP STWSNNTNAN PRLTSLTPLS SMNETLLSGV 480
  481 NYNSLLAMPP SAKNERSIGV QADDFLDRMS YNPIGRTGCT CQCQCGRGGA AIIGNTRGSS 540
  541 SRASGGSASP PSADGASQID RFSPSNHAGS IGDRTLTAAA LGVGLVDQQP AAPNHDGSAN 600
  601 QPQRYYDPFG TADLLNGTRL NSLRIGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] deduced N/A No confident structure predictions are available.
    2 View Details [106..195] deduced N/A No confident structure predictions are available.
    3 View Details [196..404] deduced N/A No confident structure predictions are available.
    4 View Details [405..627] MSA 1.004947 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle