YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: toc-1

General Information:
Name(s) found: toc-1 / CE15207 [WormBase]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • WBGene00006590 locus:toc-1 status:Confirmed UniProt:Q23281 protein_id:CCD66659.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 428 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: cation transport [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    Molecular Function: cation transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFSWVSRS LHHPQGKRGL ISTLICLACV GILAYCVSTS HSIVLMSTLW ITIFSFCSQF  60
   61 ASLYSMSITE KPTHKFSYGL ARVPVLAVFS TTVLAQLFSI FLSKESFEHL LSPDHHGSHD 120
  121 ASAAHEHEVE EIGGWPYFVG SAASSVALLL SAYALKNQPF QHVLQSATAS SLQEHAADLS 180
  181 HAVCWVIPGL SRLLLPRINS MVLLALTTTG LNLLCEHFKH DFAWADPVCC LLLSVAVFST 240
  241 MYPLSTYTGM ILLQTTPPHL INQIDRCISE ASHIDGVLEL KSGRFWQLDF NSLVGTVDVR 300
  301 VRRDADEQNV LAHVTEKFSS VITVLTVQVV KDAAWSAGEQ VPYSNGHIHK SEGNHSHDNG 360
  361 HGHSHDHNDH GHSHGHDDHG HDSHGHSHDH NEHDHGHSHG GNNDNHGHSH SAGSDNHHGH 420
  421 SHDGVFYH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..344] PSI-BLAST 42.522879 No description for 2qfiA was found.
    2 View Details [345..428] MSA 13.563996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  0.0225298510244101 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.00888573638791978 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle