YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE13347

General Information:
Name(s) found: CE13347 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00011549 status:Predicted UniProt:O62370 protein_id:CAB04704.1 [WormBase]
  • pir||T24618 hypothetical protein T06G6.8 - Caenorhabditis elegans [NCBI NR]
  • gi|3879577|emb|CAB04704.1| Hypothetical protein T06G6.8 [Caenorhabditis elegans] [NCBI NR]
  • gi|17508925|ref|NP_493227.1| hypothetical protein T06G6.8 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE13347 WBGene00011549 status:Predicted TR:O62370 protein_id:CAB04704.1 [wormpep150.fasta]
  • 13347 WBGene00011549 status:Predicted TR:O62370 protein_id:CAB04704.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, putative nuclear protein (1N313) [Caenorhabditis elegans]gi|3879577|emb|CAB04704.1| Hypothetical protein T06G6.8 [Caenorhabditis elegans]gi|7507329|pir||T24618 hypothetical protein T06G6.8 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:O62370 protein_id:CAB04704.1 [wormpep115.fasta.reversed]
  • CE13347 status:Predicted TR:O62370 protein_id:CAB04704.1 [wormpep80.hongbin]
  • CE13347 WBGene00011549 status:Predicted UniProt:O62370_CAEEL protein_id:CAB04704.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE13347 WBGene00011549 status:Predicted UniProt:O62370_CAEEL protein_id:CAB04704.1| [wormORF-contam.fasta]
  • T06G6.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein T06G6.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE13347 WBGene00011549 status:Predicted UniProt:O62370 protein_id:CAB04704.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 417 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: chromosome segregation [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGSTACWNS YYPDVTFPGV MISPRHFLTS AKLTTDGSPW TYGNGTVVQF KDICKVLRGA  60
   61 SVVHNFKDII ITAPGSTVKL KAVGGYVLNY CSELSSYLQY FPMLVEIDQD LKSFECLAHS 120
  121 SENLNKLDAL SVYNYYDTGR QATIMSVNGS NLSVKSSHAR DWLGAPLMRG SVVIGISIGR 180
  181 SPTGDSAWFL KPDNYALCGL AGICEGPAQT STAPSTRSSK LPTSSVWKAT TTPSDLPTKP 240
  241 SRTRSLTSTS TTTAKLPTTT STTFAAPQAS TEPSEATEAL ATATPADLPT KPSGREITTI 300
  301 TGTRKLSSTS TTKLPKTASK TSTARLASTE HSEAAGAPAT ATPFDLPTKP STSTTKLPST 360
  361 ASTTSAAPLA FTEPSEVAEA PANPADHEET EVLPLASGAS NWNLTFWILC FYGIKYF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..284] FFAS03 0.975 Structue of V8 Protease from Staphylococcus aureus
    2 View Details [285..417] MSA 6.154994 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.13789043718045 bayes_pls_golite062009
  • hydrolase activity
    		•  0.478516838438279 bayes_pls_golite062009
  • binding
    		•  0.0219035976011313 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle