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Protein Overview: CE10972

General Information:
Name(s) found: CE10972 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00009992 Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial status:Confirmed UniProt:Q20719 protein_id:CAB01203.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 239 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: electron transport [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: oxidoreductase activity [IEALink to PubMed article]
    NAD or NADH binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLASNVLLQ ASRLGEMVIK RGGATGLMVH RDTKENNLNV KFKFTSENQE RIKAIMDIYP  60
   61 EGHKAGALIP LLDLAQRQHG WLPISAMHEV AKILEVPRMR AYEVATFYTM FNRQPVGKYF 120
  121 LQVCATTPCM LRGAETITET IEKKLGIHAG ETTKDGLFTL AEVECLGACV NAPMIQINDD 180
  181 YFEDLTPKDV NEILDDLKAG RKPAAGPRSG RLAAEPFGEL TSLKETPPGP GFGLQAALK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..239] PSI-BLAST 49.39794 Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • NADH dehydrogenase activity
    		•  9.90105969982332 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  8.92078442660684 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  8.81403581008074 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  8.78237088091479 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  8.15019987387908 bayes_pls_golite062009
  • oxidoreductase activity
    		•  4.56566449113494 bayes_pls_golite062009
  • electron carrier activity
    		•  1.9747415675561 bayes_pls_golite062009
  • catalytic activity
    		•  0.672192331361968 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  0.429973830241021 bayes_pls_golite062009
  • binding
    		•  0.39192669546254 bayes_pls_golite062009
  • protein binding
    		•  0.157273259994554 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle