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Protein Overview: btb-6

General Information:
Name(s) found: btb-6 / CE10448 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00018438 locus:btb-6 status:Confirmed UniProt:O16741 protein_id:CCD71256.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 319 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: positive regulation of embryonic development [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKTKNETLE FASDWMYATL PITFYSDCNG LKCNVSIFNP DDQFLSTVKF DWDQKVIKDL  60
   61 TGTFTWIFDN SGGSCNQQLE SITLDKPGQC YAQKINWNVF DYNYLRCKYS LTPNCCQEKC 120
  121 SDNKVALTPK KSPGQKVPEH KPTDHEIGSD VSYEKLFAPS NRHDAVLLIG EKKLHVSKAF 180
  181 LSYHSDYFSD LFADKINEEI RLEDVSYEDF GLLMSIIHPE TGFVNDQNAE KLLHLGNRFK 240
  241 ISCVIHQVEH HFTRGTNFSN ERLIFLADKY ELQKLLEKAI QEMNSLDKAK KFGGSDDYKK 300
  301 LSDFARGKIS DRLMQLLIN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] PSI-BLAST 14.39794 Solution structure of N-terminal domain of speckle-type POZ protein
    2 View Details [134..239] PSI-BLAST 21.69897 No description for 2nn2A was found.
    3 View Details [240..319] PSI-BLAST 5.30103 No description for 2eqxA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.33435233481202 bayes_pls_golite062009
  • protein binding
    		•  0.90216988634563 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle