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Protein Overview: tbc-3

General Information:
Name(s) found: tbc-3 / CE09863 [WormBase]
Description(s) found:
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  • WBGene00009322 locus:tbc-3 status:Confirmed UniProt:O45434 protein_id:CAB03042.1 [WormBase]
  • pir||T21643 hypothetical protein F32B6.8 - Caenorhabditis elegans [NCBI NR]
  • gi|71987572|ref|NP_001023165.1| TBC (Tre-2/Bub2/Cdc16) domain family member (tbc-3) [Caenorhabditis elegans] [NCBI NR]
  • gi|3876566|emb|CAB03042.1| C. elegans protein F32B6.8b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_501783.1| tbc1 domain family protein (56.5 kD) (4K665) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE09863 WBGene00009322 Yeast ORF YOR070C protein like status:Partially_confirmed TR:O45434 protein_id:CAB03042.1 [wormpep150.fasta]
  • 09863 WBGene00009322 Yeast ORF YOR070C protein like status:Partially_confirmed TR:O45434 protein_id:CAB03042.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • tbc1 domain family protein (56.5 kD) (4K665) [Caenorhabditis elegans]gi|3876566|emb|CAB03042.1| Hypothetical protein F32B6.8b [Caenorhabditis elegans]gi|7500331|pir||T21643 hypothetical protein F32B6.8 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • Yeast ORF YOR070C protein like status:Partially_confirmed TR:O45434 protein_id:CAB03042.1 [wormpep115.fasta.reversed]
  • CE09863 Yeast ORF YOR070C protein like status:Partially_confirmed TR:O45434 protein_id:CAB03042.1 [wormpep80.hongbin]
  • CE09863 WBGene00009322 locus:tbc-3 Yeast ORF YOR070C protein like status:Confirmed UniProt:O45434_CAEEL protein_id:CAB03042.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE09863 WBGene00009322 Yeast ORF YOR070C protein like status:Confirmed UniProt:O45434_CAEEL protein_id:CAB03042.1| [wormORF-contam.fasta]
  • Hypothetical protein F32B6.8b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F32B6.8b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE09863 WBGene00009322 Yeast ORF YOR070C protein like status:Confirmed TR:O45434 protein_id:CAB03042.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE09863 WBGene00009322 locus:tbc-3 Yeast ORF YOR070C protein like status:Confirmed UniProt:O45434 protein_id:CAB03042.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE09863 WBGene00009322 locus:tbc-3 status:Confirmed UniProt:O45434 protein_id:CAB03042.1 [wormpep246-ecoli-contam.fasta]
  • TBC (Tre-2/Bub2/Cdc16) domain family OS=Caenorhabditis elegans GN=tbc-3 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 495 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: regulation of Rab GTPase activity [IEALink to PubMed article]
    Molecular Function: Rab GTPase activator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRWSAGSTP GSVKPVYGAR YPPLHHASPT KGVEIPGRMN KFQDYENSVS DAWDTRVKVD  60
   61 ETLASASAAK VLAAHAAGKT HRDEEIMPPV SAAPTKNSRQ QALQRLAIQK EPLPSSVSST 120
  121 PQTANPIYPK LPEISDQPRS AVPMASAPPH GGDRDQTRFA RLRRLFSNGK SSGKNSPPVD 180
  181 VDLEKLREDC WMGIPHKLRP QAWRLLSGYL PTNAERREVT LQCKRDEYWH YVEQYFHSRF 240
  241 DDQNADTFRQ INIDIPRMCP LIPLFQQKMV QEMFERILYI WAIRHPASGY VQGINDLVTP 300
  301 FFVVFLSEFI PQDVEVGSFD VSQLPLEQCQ LIEADSFWCV SSLLDSIQDN YTFAQPGIQR 360
  361 KVLQLRHLMS RVDRPLHKHL ESNGIEYLQF AFRWMNNLLM REIPLRATIR LWDTYLSEPD 420
  421 GFMQFHNYVC AAFLRTWSKQ LQAEKDFQGV MILLQNLPTQ SWGDREICEL TADAFSLQSV 480
  481 FDGARRHLSA QAASP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] deduced N/A No confident structure predictions are available.
    2 View Details [151..495] PSI-BLAST 70.522879 No description for 2qfzA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle