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Protein Overview: CE09647

General Information:
Name(s) found: CE09647 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00009116 locus:snx-27 status:Confirmed UniProt:Q93566 protein_id:CAB02091.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 578 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell communication [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]
    phosphoinositide binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQSYDYDSD DSQTTSDEHI NSRHSSRSDT ASSSSSFTPQ IIFNPRPHVV KVVKSETGFG  60
   61 FNVKGQVSEG GQLRSLNGQL YAPLQHVSAV LRRGAADQAG LRKGDRILEV NGLNVEGSTH 120
  121 RKVVDLIKNG GDELTMIVIS VEDPDMDRFD YGEESSMAYG HDYSENRSLP VTIPSYNTVQ 180
  181 DSLERYTVFN IHMAGRQLGS RRYSEFVELH LALKKHFYDY CFPQLPGKWP FKLSEQQLDS 240
  241 RRRGLEQYLE KICTIRVIAE SELVQKFLME CDPMCEVEIR LMLPDGSPIT IRTRRSITSS 300
  301 LFFTSAQRRL KMSREGAAAC SIFELLDNSF ERKVSESESV HELYTHNYSS ASSSCLLLRK 360
  361 FIFDIDRERA LCKRDMVFKQ FCFVQAIADL HSGKVVTSRK SYQLRAIQNE ENMDELLEMA 420
  421 RELEGYNQVT FPPSVCILRK RRQTVIMVVR FANLLLKCPE DGNSMEIDWS RIKDFRVCDE 480
  481 ATAFSFEYIR DEVGDSEQEQ TEPRKTKYVR LETGFAEYMA ECFAEIQFER QAGSDWKRDQ 540
  541 NRVAATPEPL PETIEPQPTT HKIQFEKRIL EQHRDCID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..218] PSI-BLAST 17.522879 solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin
    2 View Details [219..274] PSI-BLAST 6.0 crystal structure of CISK-PX domain
    3 View Details [275..578] FFAS03 2.76 Moesin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  1.17061604473174 bayes_pls_golite062009
  • protein binding
    		•  0.911384909562142 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle