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Protein Overview: CE09380

General Information:
Name(s) found: CE09380 [WormBase]
Description(s) found:
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  • WBGene00008789 status:Confirmed UniProt:Q19452 protein_id:CAB01156.1 [WormBase]
  • pir||T20884 hypothetical protein F14D7.2 - Caenorhabditis elegans [NCBI NR]
  • gi|3875871|emb|CAB01156.1| C. elegans protein F14D7.2, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17559624|ref|NP_506540.1| hypothetical protein F14D7.2 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE09380 WBGene00008789 status:Partially_confirmed TR:Q19452 protein_id:CAB01156.1 [wormpep150.fasta]
  • 09380 WBGene00008789 status:Partially_confirmed TR:Q19452 protein_id:CAB01156.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative nuclear protein (49.4 kD) (5O772) [Caenorhabditis elegans]gi|3875871|emb|CAB01156.1| Hypothetical protein F14D7.2 [Caenorhabditis elegans]gi|7499084|pir||T20884 hypothetical protein F14D7.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q19452 protein_id:CAB01156.1 [wormpep115.fasta.reversed]
  • CE09380 status:Partially_confirmed TR:Q19452 protein_id:CAB01156.1 [wormpep80.hongbin]
  • CE09380 WBGene00008789 status:Partially_confirmed UniProt:Q19452_CAEEL protein_id:CAB01156.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • C. elegans protein F14D7.2, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • CE09380 WBGene00008789 status:Partially_confirmed UniProt:Q19452_CAEEL protein_id:CAB01156.1| [wormORF-contam.fasta]
  • Hypothetical protein F14D7.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F14D7.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE09380 WBGene00008789 status:Confirmed UniProt:Q19452 protein_id:CAB01156.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F14D7.2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 457 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: morphogenesis of an epithelium [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNKTWIFDA INQWFNDDIP GLIGSLQRLP SGSENGGTGS SFFRRGMMSN ESESSAHDDK  60
   61 VIKKQPETSS SSPEHRSPRR SKSAPPSSSN PPASASTFLE TVKNWFSCST KPPVTCRTEF 120
  121 TELEARPAIP PLGNLEGLTD SPTPRTPVNQ GPSLPYAGGR EALGIPFMDR TPSDTERTDE 180
  181 ASTSSRLPTG TTGSGITFPA NKNNDSDKAS QASVDSDLKR ETQIPNYPRR RPDSDPPGGR 240
  241 VTSPSDVQSG ASSHTRESDE TPDISADGAK KLDNITEESG TPEEELMSGR DSEDEGLRRK 300
  301 RPKLQVEGKD VKRSDCYSPS ECSTQPSSGS STALIVPTKA GKSSDDLRKA RADRKAEQKA 360
  361 EKARKRPSNP SEKKLTSAEK LMAASNIPKD VSPATNAVLL DKLHDNMAGY GKVDDVDEDA 420
  421 GDGQGSSDKN NKDDEDDDDS IFGKVVKDYE DNLFDLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..223] deduced N/A No confident structure predictions are available.
    2 View Details [224..293] deduced N/A No confident structure predictions are available.
    3 View Details [294..457] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle