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Protein Overview: CE09160

General Information:
Name(s) found: CE09160 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00008490 status:Partially_confirmed UniProt:G5EF21 protein_id:CAB02888.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 430 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEALink to PubMed article]
    cysteine biosynthetic process from serine [IEALink to PubMed article]
    Molecular Function: pyridoxal phosphate binding [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    cysteine synthase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILIILISC LLPFSVADDL TQISHNEIPN EDIVSDDESK WRLEAIHKMW EERRKMGHTP  60
   61 LVKFSPPGFP NTDIFFKNET VSATRTLKHR FAWALLLWAI VEGKVTSKTS AVYDATSGNM 120
  121 GSAEAYMCTL VGIPYFAVVS EECEQEKIDN IEKFGGKVIK VPTALRTTKS NEFAIENNGF 180
  181 YINQQKNAAL AEEFHESGDF INYESSNVFH EILVQLKDNE KQTSKVPDFF VHPAGTGGTV 240
  241 SSVGRYVVKY GLPTKVVLAD SQFSVYYDYV IGNKFTNQTG EKVWRAPGIA GTGYGYDIVP 300
  301 IQYGETTSLT KNVINEAMKM PDIATVAAMR ILNEMGYNAG ASTSLNFLVC LYKAYQTKQK 360
  361 SSNNEYQLTI ATLAGDPGDF YHSTYLDDGW VDTHLNYVGG VTAMECWKKL IQESIDTGSN 420
  421 FYLNGLTMCS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..430] PSI-BLAST 86.221849 Cystathionine beta-synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cysteine synthase activity
    		•  5.18562032111987 bayes_pls_golite062009
  • catalytic activity
    		•  2.38994231321972 bayes_pls_golite062009
  • lyase activity
    		•  1.87743897464083 bayes_pls_golite062009
  • cystathionine beta-synthase activity
    		•  1.4517088142802 bayes_pls_golite062009
  • tryptophan synthase activity
    		•  1.04832999357666 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.923824749425553 bayes_pls_golite062009
  • threonine synthase activity
    		•  0.727838845253199 bayes_pls_golite062009
  • ammonia-lyase activity
    		•  0.476674617721478 bayes_pls_golite062009
  • L-threonine ammonia-lyase activity
    		•  0.37325071016009 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
    		•  0.249761226675912 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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