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Protein Overview: ttr-44

General Information:
Name(s) found: ttr-44 / CE09030 [WormBase]
Description(s) found:
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  • WBGene00008341 locus:ttr-44 status:Confirmed UniProt:Q18878 protein_id:CAB01136.1 [WormBase]
  • pir||T20267 hypothetical protein C56A3.2 - Caenorhabditis elegans [NCBI NR]
  • gi|3875268|emb|CAB01136.1| C. elegans protein C56A3.2, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17559006|ref|NP_506352.1| TransThyretin-Related family domain family member (ttr-44) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE09030 WBGene00008341 Transthyretin-like family status:Confirmed TR:Q18878 protein_id:CAB01136.1 [wormpep150.fasta]
  • 09030 WBGene00008341 Transthyretin-like family status:Confirmed TR:Q18878 protein_id:CAB01136.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • transthyretin-like protein precursor family member (17.8 kD) (5O10) [Caenorhabditis elegans]gi|3875268|emb|CAB01136.1| Hypothetical protein C56A3.2 [Caenorhabditis elegans]gi|7498005|pir||T20267 hypothetical protein C56A3.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • Transthyretin-like family status:Confirmed TR:Q18878 protein_id:CAB01136.1 [wormpep115.fasta.reversed]
  • CE09030 Transthyretin-like family status:Confirmed TR:Q18878 protein_id:CAB01136.1 [wormpep80.hongbin]
  • CE09030 WBGene00008341 locus:ttr-44 Transthyretin-like family status:Confirmed UniProt:Q18878_CAEEL protein_id:CAB01136.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE09030 WBGene00008341 locus:ttr-44 Transthyretin-like family status:Confirmed UniProt:Q18878_CAEEL protein_id:CAB01136.1| [wormORF-contam.fasta]
  • Hypothetical protein C56A3.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C56A3.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE09030 WBGene00008341 locus:ttr-44 Transthyretin-like family status:Confirmed UniProt:Q18878 protein_id:CAB01136.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE09030 WBGene00008341 locus:ttr-44 status:Confirmed UniProt:Q18878 protein_id:CAB01136.1 [wormpep246-ecoli-contam.fasta]
  • TransThyretin-Related family domain OS=Caenorhabditis elegans GN=ttr-44 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 156 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTLLLALFS LAMVQAMRDQ SIAVKGRLIC GDKPAANVRI KLWEEDSGPD PDDLLEAGYT  60
   61 DSNGEFQLSG GEAELTPIDP IFKVYHDCDD KYIPGHRKVK FLIPKSYITQ GKTPKKTFDL 120
  121 GVLNLETIFP KEERELIVSR KRRHHPKQYI NEEDSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] Pfam 72.49485 No description for PF01060.14 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle