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Protein Overview: CE08785

General Information:
Name(s) found: CE08785 [WormBase]
Description(s) found:
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  • WBGene00016729 Probable actin-related protein 2\/3 complex subunit 5 status:Partially_confirmed UniProt:P91167 protein_id:CCD66217.1 [WormBase]
  • gi|9802872|gb|AAF99882.1| Hypothetical protein C46H11.3 [Caenorhabditis elegans] [NCBI NR]
  • pir||T25640 hypothetical protein C46H11.3 - Caenorhabditis elegans [NCBI NR]
  • gi|3121773|sp|P91167.1|ARPC5_CAEEL RecName: Full=Probable actin-related protein 2/3 complex subunit 5; AltName: Full=Arp2/3 complex 16 kDa subunit; Short=p16-ARC [NCBI NR]
  • gi|17506047|ref|NP_491506.1| hypothetical protein C46H11.3 [Caenorhabditis elegans] [NCBI NR]
  • Probable actin-related protein 2/3 complex subunit 5 OS=Caenorhabditis elegans GN=C46H11.3 PE=3 SV=1 [Swiss-Prot]
  • (P91167) Probable ARP2/3 complex 16 kDa subunit (p16-ARC) [Swiss-Prot]
  • [wormpep67.fasta]
  • CE08785 WBGene00016729 status:Partially_confirmed SW:P91167 protein_id:AAF99882.1 [wormpep150.fasta]
  • 08785 WBGene00016729 status:Predicted SW:P91167 protein_id:AAF99882.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • actin related protein 2 3 complex 16kDa (1F609) [Caenorhabditis elegans]gi|9802872|gb|AAF99882.1| Hypothetical protein C46H11.3 [Caenorhabditis elegans]gi|7497520|pir||T25640 hypothetical protein C46H11.3 - Caenorhabditis elegansgi|3121773|sp|P91167|AR [nrdb_11152004_Chlamydomonas]
  • CE08785 WBGene00016729 status:Predicted SW:P91167 protein_id:AAF99882.1 [wormpep132.fasta]
  • 08785 WBGene00016729 status:Partially_confirmed SW:P91167 protein_id:AAF99882.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Predicted SW:P91167 protein_id:AAF99882.1 [wormpep115.fasta.reversed]
  • CE08785 status:Predicted SW:P91167 protein_id:AAF99882.1 [wormpep80.hongbin]
  • CE08785 WBGene00016729 status:Partially_confirmed UniProt:P91167 protein_id:AAF99882.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE08785 WBGene00016729 status:Partially_confirmed UniProt:P91167 protein_id:AAF99882.1| [wormORF-contam.fasta]
  • Hypothetical protein C46H11.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C46H11.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Probable actin-related protein 2/3 complex subunit 5 (ARP2/3 complex 16 kDa subunit) (p16-ARC) [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE08785 WBGene00016729 status:Partially_confirmed UniProt:P91167 protein_id:CCD66217.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE08785 WBGene00016729 status:Partially_confirmed UniProt:P91167 protein_id:CCD66217.1 Probable actin-related protein 2\/3 complex subunit 5 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 146 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEALink to PubMed article]
    Biological Process: regulation of actin filament polymerization [IEALink to PubMed article]
    methylation [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNTDYKKYN VDIFHPAHFE DIQEESADCG PNVQEVRQFL ESNRLEYALQ SVLLNPPFGH  60
   61 SEQELKNRAV LLVAEVIHAF RQTDIEESVH KLSNENGDIL MKYIYKAMQL CSDSATCLSL 120
  121 LLWHSQLVSK FGQGSIVRVL SNRQRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] PSI-BLAST 59.09691 Arp2/3 complex 16 kDa subunit ARPC5

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  4.05206194993572 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.8232927372914 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  1.81816151576197 bayes_pls_golite062009
  • binding
    		•  1.47072140214723 bayes_pls_golite062009
  • structural molecule activity
    		•  0.741023826941194 bayes_pls_golite062009
  • protein binding
    		•  0.727270535642847 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle