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Protein Overview: CE08351

General Information:
Name(s) found: CE08351 [WormBase]
Description(s) found:
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  • WBGene00016063 locus:delm-2 status:Partially_confirmed UniProt:P91103 protein_id:CCD63872.1 [WormBase]
  • pir||T25572 hypothetical protein C24G7.1 - Caenorhabditis elegans [NCBI NR]
  • gi|1825743|gb|AAB42337.1| Hypothetical protein C24G7.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|17505683|ref|NP_491296.1| hypothetical protein C24G7.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE08351 WBGene00016063 status:Partially_confirmed TR:P91103 protein_id:AAB42337.1 [wormpep150.fasta]
  • 08351 WBGene00016063 status:Partially_confirmed TR:P91103 protein_id:AAB42337.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • sodium channel family member (1E681) [Caenorhabditis elegans]gi|1825743|gb|AAB42337.1| Hypothetical protein C24G7.1 [Caenorhabditis elegans]gi|7496417|pir||T25572 hypothetical protein C24G7.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:P91103 protein_id:AAB42337.1 [wormpep115.fasta.reversed]
  • CE08351 status:Predicted TR:P91103 protein_id:AAB42337.1 [wormpep80.hongbin]
  • CE08351 WBGene00016063 status:Partially_confirmed UniProt:P91103_CAEEL protein_id:AAB42337.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE08351 WBGene00016063 status:Partially_confirmed UniProt:P91103_CAEEL protein_id:AAB42337.1| [wormORF-contam.fasta]
  • C24G7.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C24G7.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE08351 WBGene00016063 status:Partially_confirmed UniProt:P91103 protein_id:AAB42337.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE08351 WBGene00016063 status:Partially_confirmed UniProt:P91103 protein_id:CCD63872.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE08351 WBGene00016063 locus:delm-2 status:Partially_confirmed UniProt:P91103 protein_id:CCD63872.1 [wormpep246-ecoli-contam.fasta]
  • DEgenerin Linked to Mechanosensation OS=Caenorhabditis elegans GN=delm-2 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 608 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: ion channel activity [IEALink to PubMed article]
    sodium channel activity [IEALink to PubMed article]
    amiloride-sensitive sodium channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPTISKPKT NQSTKSARKS SNESPYPSVT FRPNSSLSHL IIEVPVAQLK KFKHAGETVS  60
   61 VERETQHFCE TTTMHGPKRI FQGKRWATLF WLIMVCTSIG LLITQVCILA SNYLSKPVVS 120
  121 DVSFLINEEG IQFPQITICN FTPIRKTFVN EMNKTGQISP NMINYIMHWF TEVPILIGSS 180
  181 NWQLLHEGNK DLQEYQKNNP NFTVQGFFID AGFSCSDIFK LCSFQGETFD CCSISTPVLT 240
  241 PLGKCYTLDL LSSTKPSMHK QTEPGIQAGL AITLDAHLEE QFDGSNGMDA LFTNSFVNGF 300
  301 QYFVHPPNTI PHLSSDEFTV TPNSVAYTAI SSERFELLPT NKWGNCTEHY PSGIKSDLPY 360
  361 LTGNCVSLCK AKFFMENCGC TPAVYNNERN LKECTPFETL ACVNNHNGSN NATGKLEFKL 420
  421 PRCAQCAQQC NNLIYRAFNS QGNQFSARAF EWFRTNNSNW TMAHIKTNFQ IIHIFYQDMS 480
  481 NTEYNQVQDA SISDLLSNIG GNMGMFLGMS LITITEICLY FSKIIWLGIS KKRREYMYSK 540
  541 RVHEKTHKKE IVETVEKMKV IESKRKLSSP IGFENQISWN SNDNVEFRIN LNNLEREFEA 600
  601 VGSRSVLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..608] PSI-BLAST 102.0 No description for 2qtsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle