YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: clc-1

General Information:
Name(s) found: clc-1 / CE08040 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00000522 locus:clc-1 status:Confirmed UniProt:Q93198 protein_id:CAB01719.1 [WormBase]
  • pir||T19126 hypothetical protein C09F12.1 - Caenorhabditis elegans [NCBI NR]
  • gi|3874178|emb|CAB01719.1| C. elegans protein C09F12.1, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17550278|ref|NP_509847.1| CLaudin-like in Caenorhabditis family member (clc-1) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE08040 WBGene00000522 locus:clc-1 status:Confirmed TR:Q93198 protein_id:CAB01719.1 [wormpep150.fasta]
  • 08040 WBGene00000522 locus:clc-1 status:Confirmed TR:Q93198 protein_id:CAB01719.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • CLaudin-like in Caenorhabditis (19.9 kD) (clc-1) [Caenorhabditis elegans]gi|3874178|emb|CAB01719.1| Hypothetical protein C09F12.1 [Caenorhabditis elegans]gi|7495748|pir||T19126 hypothetical protein C09F12.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:clc-1 status:Confirmed TR:Q93198 protein_id:CAB01719.1 [wormpep115.fasta.reversed]
  • CE08040 locus:clc-1 status:Confirmed TR:Q93198 protein_id:CAB01719.1 [wormpep80.hongbin]
  • CE08040 WBGene00000522 locus:clc-1 status:Confirmed UniProt:Q93198_CAEEL protein_id:CAB01719.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE08040 WBGene00000522 locus:clc-1 status:Confirmed UniProt:Q93198_CAEEL protein_id:CAB01719.1| [wormORF-contam.fasta]
  • CLaudin-like in Caenorhabditis family member (clc-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C09F12.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE08040 WBGene00000522 locus:clc-1 status:Confirmed UniProt:Q93198 protein_id:CAB01719.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CLaudin-like in Caenorhabditis OS=Caenorhabditis elegans GN=clc-1 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 182 amino acids

    Gene Ontology:
    Cellular Component: cell-cell junction [IDALink to PubMed article]
    Biological Process: molting cycle, collagen and cuticulin-based cuticle [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLSGLTQIL YGLIMAGSAI LTAVALFTPS WNTVENNVKD ITHINTSEWN GLMPWSCIGH  60
   61 SQGTQCQDWW ANLPGWMKCV VVCMILSLIV QIFAVVYNFL TCLACCCKKY IIHPLTLFAV 120
  121 ISTILLLIAV IVYAAEWNQF TNGINTNSQL GYSFWLAVGA LILSAADVIL GALTVCLGEH 180
  181 CC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..182] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle