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Protein Overview: CE07953

General Information:
Name(s) found: CE07953 [WormBase]
Description(s) found:
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  • WBGene00015504 status:Partially_confirmed UniProt:O01477 protein_id:CCD61216.1 [WormBase]
  • pir||T25519 hypothetical protein C06A5.6 - Caenorhabditis elegans [NCBI NR]
  • gi|1943782|gb|AAB52439.1| Hypothetical protein C06A5.6 [Caenorhabditis elegans] [NCBI NR]
  • gi|17505498|ref|NP_491730.1| hypothetical protein C06A5.6 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE07953 WBGene00015504 status:Partially_confirmed TR:O01477 protein_id:AAB52439.1 [wormpep150.fasta]
  • 07953 WBGene00015504 status:Partially_confirmed TR:O01477 protein_id:AAB52439.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative nuclear protein (1G560) [Caenorhabditis elegans]gi|1943782|gb|AAB52439.1| Hypothetical protein C06A5.6 [Caenorhabditis elegans]gi|7495481|pir||T25519 hypothetical protein C06A5.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:O01477 protein_id:AAB52439.1 [wormpep115.fasta.reversed]
  • CE07953 status:Partially_confirmed TR:O01477 protein_id:AAB52439.1 [wormpep80.hongbin]
  • CE07953 WBGene00015504 status:Partially_confirmed UniProt:O01477_CAEEL protein_id:AAB52439.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE07953 WBGene00015504 status:Partially_confirmed UniProt:O01477_CAEEL protein_id:AAB52439.1| [wormORF-contam.fasta]
  • Hypothetical protein C06A5.6 [Caenorhabditis elegans] [NCBI-RefSeq_multi-organisms_na_04-20-2009_reversed.fasta]
  • C06A5.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE07953 WBGene00015504 status:Partially_confirmed UniProt:O01477 protein_id:AAB52439.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE07953 WBGene00015504 status:Partially_confirmed UniProt:O01477 protein_id:CCD61216.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C06A5.6 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 691 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipid storage [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNEKQQWDD AYCLAEEMHD AGRPFKREEL NIADQFICSR FSTIFEYDPY KDTYGFRNQE  60
   61 LTHAIPVKSK CRHISDVDIL ELKKNTANAD IRFPSYLNIC PVYAMHPFTV LAFDLSKPVP 120
  121 MGMNASMENA APNMKSPTEA EITPGTIYIF KHRDNKCYRC VILFEDGDNN VSDADRKYMV 180
  181 AFLDTPQVVS VKLKTLFHLG KFTIESYPCA LYCCRAVGIL EIRKDFGADL NGQINEFYKD 240
  241 KVKRKSGVHA LIYKKDDRGD KLIFDCPSIL GTSMTMALEI KDVIGHRSVA ENDPTALSYD 300
  301 ELVSKQLPTV DIDDHNSSVV LDLEESVIAQ ELGSTNGADC PCNNDNIDDF MQSQRQNPLD 360
  361 NNRDNWDRIN ESRSSMQSFA INQSQAITAN PTPQPTFDES SGEVQTIPES INNLALNGRY 420
  421 LEDGRGTEEI REERSVESRQ IGNQVVSQAS CNYLEARQNS TQTANAESVC AIISESHAAL 480
  481 PTDIQVIPSQ HVLNENNHTV LPSVAPIIRN ATGHSHIFGR QIPSPAFRRE SLSSGNSIQV 540
  541 ATFAATTGPC GSNTSRPTAQ NTANSSINQD MSISNSSTNA RLITIAQDNL NDTENWPNSE 600
  601 REQSATEMES GAEATTNSAV DEFAQVSDDM KGLADSMINF LRLTANSNNQ DAFKANIFAM 660
  661 ELISTKIPNQ LTKRFFTLKI AEAKSLAEGF N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] deduced N/A No confident structure predictions are available.
    2 View Details [233..386] MSA 1.214994 View MSA. No confident structure predictions are available.
    3 View Details [387..613] MSA 3.226994 View MSA. No confident structure predictions are available.
    4 View Details [614..691] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle