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Protein Overview: CE07923

General Information:
Name(s) found: CE07923 [WormBase]
Description(s) found:
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  • WBGene00015462 status:Confirmed UniProt:O16312 protein_id:CCD63091.1 [WormBase]
  • pir||T31744 hypothetical protein C05C8.5 - Caenorhabditis elegans [NCBI NR]
  • gi|2291256|gb|AAB65372.1| Hypothetical protein C05C8.5 [Caenorhabditis elegans] [NCBI NR]
  • gi|17557646|ref|NP_504838.1| hypothetical protein C05C8.5 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE07923 WBGene00015462 status:Partially_confirmed TR:O16312 protein_id:AAB65372.1 [wormpep150.fasta]
  • 07923 WBGene00015462 status:Partially_confirmed TR:O16312 protein_id:AAB65372.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • exonuclease (67.2 kD) (5H714) [Caenorhabditis elegans]gi|2291256|gb|AAB65372.1| Hypothetical protein C05C8.5 [Caenorhabditis elegans]gi|7495421|pir||T31744 hypothetical protein C05C8.5 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:O16312 protein_id:AAB65372.1 [wormpep115.fasta.reversed]
  • CE07923 status:Partially_confirmed TR:O16312 protein_id:AAB65372.1 [wormpep80.hongbin]
  • CE07923 WBGene00015462 status:Partially_confirmed UniProt:O16312_CAEEL protein_id:AAB65372.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE07923 WBGene00015462 status:Partially_confirmed UniProt:O16312_CAEEL protein_id:AAB65372.1| [wormORF-contam.fasta]
  • Hypothetical protein C05C8.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C05C8.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE07923 WBGene00015462 status:Partially_confirmed UniProt:O16312 protein_id:AAB65372.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE07923 WBGene00015462 status:Confirmed UniProt:O16312 protein_id:CCD63091.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C05C8.5 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 594 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: exonuclease activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRELRKSL KSEIENLFKS PEQAEHEFQC ATKRRRLTSS EKPTKSPSTS SDDPSKPKLE  60
   61 LRLSRLGDGH RLDCETLAQF IHFSIFGSSL QKPRWVSLSH HRNVLQNLVV RVNVDDDFFT 120
  121 TTNLSFLSEF FEKQWIELDS DVSDRGLFWN SIMQVRLTIQ EQIRRKSVIM QKTYDRDGKH 180
  181 DKSHFVLTTE QLAQRRYPFP GEEGVVPTKQ GYKKISASSP MFSVDCEMCE TDVANRELTR 240
  241 ISIVDEFENT ILDTLVKPEG RITDYVTRWS GITPDMMEGV TTTLGDVQKA IQSLLPPDAI 300
  301 LVGHSLEHDL QAMKMTHPFC LDVGHVLNYT NSNTEFRNSL KNLTELFLGA QIQSEFGHCS 360
  361 YEDAWAAMRL AQLKLEKGLM FGNVSFGWKY SEYAKNNGAV EKKIVTAAEI TSKPCTDCSQ 420
  421 PTVVACTVAN CRCRFVSTPS KCVHCVKIGI SAQGDFHWQD TLDVDHEKKA SPIGNYLKKD 480
  481 KMKSVMCAFD TAILDCPPIS KKVRSKLHSS FPSYNGFVNS VASEMLNDSV ILVEIDKEKI 540
  541 EPLEETDSEQ GEVPDNAEAL NRILEKLVAA TAKNSLIMMI LSNSTKNVLY VRVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..217] deduced N/A No confident structure predictions are available.
    2 View Details [218..318] PSI-BLAST 29.0 human ISG20
    3 View Details [319..594] PSI-BLAST 9.69897 Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle