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Protein Overview: CE07540

General Information:
Name(s) found: CE07540 [WormBase]
Description(s) found:
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  • WBGene00020811 status:Partially_confirmed UniProt:Q22784 protein_id:AAC69019.1 [WormBase]
  • pir||T34377 hypothetical protein T25G12.3 - Caenorhabditis elegans [NCBI NR]
  • gi|17570071|ref|NP_510792.1| hypothetical protein T25G12.3 [Caenorhabditis elegans] [NCBI NR]
  • gi|1125835|gb|AAC69019.1| Hypothetical protein T25G12.3 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE07540 WBGene00020811 status:Partially_confirmed TR:Q22784 protein_id:AAC69019.1 [wormpep150.fasta]
  • 07540 WBGene00020811 status:Predicted TR:Q22784 protein_id:AAC69019.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, putative mitochondrial protein (XR849) [Caenorhabditis elegans]gi|1125835|gb|AAC69019.1| Hypothetical protein T25G12.3 [Caenorhabditis elegans]gi|7508461|pir||T34377 hypothetical protein T25G12.3 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • CE07540 WBGene00020811 status:Predicted TR:Q22784 protein_id:AAC69019.1 [wormpep132.fasta]
  • 07540 WBGene00020811 status:Partially_confirmed TR:Q22784 protein_id:AAC69019.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Predicted TR:Q22784 protein_id:AAC69019.1 [wormpep115.fasta.reversed]
  • CE07540 status:Predicted TR:Q22784 protein_id:AAC69019.1 [wormpep80.hongbin]
  • CE07540 WBGene00020811 status:Partially_confirmed UniProt:Q22784_CAEEL protein_id:AAC69019.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE07540 WBGene00020811 status:Partially_confirmed UniProt:Q22784_CAEEL protein_id:AAC69019.1| [wormORF-contam.fasta]
  • Hypothetical protein T25G12.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • T25G12.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE07540 WBGene00020811 status:Partially_confirmed UniProt:Q22784 protein_id:AAC69019.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 80 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: hermaphrodite genitalia development [IMP]
    morphogenesis of an epithelium [IMP]
    locomotion [IMP]
    embryonic development ending in birth or egg hatching [IMP]
    body morphogenesis [IMP]
    oviposition [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHVYMLGWG GNGLIGTTSA KPSIVVSTTT TTTAQPTTAI ATTTINTIIS STVRPIVVTK  60
   61 KPLPVLSKKQ PAKKRKLDSG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle