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Protein Overview: CE07537

General Information:
Name(s) found: CE07537 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00020808 status:Confirmed UniProt:Q23050 protein_id:CCD74240.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 406 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVEDEYED EEEIEEDEPV ADENQEPEAE EPEAEEEAPA PAAASPRAAA PPASLKSPTP  60
   61 GRQQVNFTPS IPQSVLRKQQ NYSSGKPSTI HTKEKLMRSE GIIPIQAGSN KYASQKGMTG 120
  121 FGVPRDVIDK VKSDNLAEIT DEKKIANLKG STWLQSGTNK FASQKGQSGF GAVRDVNYKT 180
  181 KGTGGASEVP EEKARASDGI VPLQSGTNKL ASQAGMTGIG MPRIVDVRRT NDQDRDSQGF 240
  241 IHLQMGTNKF ANQAGMTGFG MPRHNITKYK DEVRGDMPHD EGTLSRQTSG WKEGASQAGM 300
  301 TGFGAFRNNT VAFMQAQDQR SQGMIPYQMG VNFLESQAGK TGFGQPRQVY TPFTDDTHED 360
  361 LPADIARRPD VPFWTGQKEA DHANQTGMTA FGTPRDVRGE YVRRMW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..173] PSI-BLAST 33.09691 Solution structure of the CH domain of human Calponin 1
    2 View Details [174..269] deduced N/A No confident structure predictions are available.
    3 View Details [270..406] MSA 8.051986 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle