Protein Overview: CE07254

General Information:
Name(s) found:	CE07254 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00018416 Reverse Transcriptase status:Partially_confirmed SW:P34431 protein_id:AAA28035.2 [WormBase] gi\|17553442\|ref\|NP_498959.1\| RETRotransposon-like family member (retr-1) [Caenorhabditis elegans] [NCBI NR] gi\|14550378\|gb\|AAA28035.2\| C. elegans RETR-1 protein, isoform a [Caenorhabditis elegans] [NCBI NR] [wormpep67.fasta] CE07254 WBGene00018416 Reverse Transcriptase status:Partially_confirmed SW:P34431 protein_id:AAA28035.2 [wormpep150.fasta] 07254 WBGene00018416 Reverse Transcriptase status:Partially_confirmed SW:P34431 protein_id:AAA28035.2 [wormpep130-phg-ecoli-orf-rand.fasta] zn-finger, CCHC type and RNA-directed DNA polymerase and Integrase, catalytic domain containing protein (3J949) [Caenorhabditis elegans]gi\|14550378\|gb\|AAA28035.2\| Hypothetical protein F44E2.2a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] Reverse Transcriptase status:Partially_confirmed SW:P34431 protein_id:AAA28035.2 [wormpep115.fasta.reversed] CE07254 Reverse Transcriptase status:Partially_confirmed SW:P34431 protein_id:AAA28035.2 [wormpep80.hongbin] CE07254 WBGene00018416 locus:retr-1 Reverse Transcriptase status:Partially_confirmed UniProt:YL52_CAEEL protein_id:AAA28035.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE07254 WBGene00018416 locus:retr-1 Reverse Transcriptase status:Partially_confirmed UniProt:YL52_CAEEL protein_id:AAA28035.2\| [wormORF-contam.fasta] Hypothetical protein F44E2.2a [Caenorhabditis elegans] [nr-271106-contam.fasta] F44E2.2a [Caenorhabditis elegans] [nr-271106-contam.fasta] CE07254 WBGene00018416 locus:retr-1 Reverse Transcriptase status:Partially_confirmed SW:P34431 protein_id:AAA28035.2 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
Organism:	Caenorhabditis elegans
Length:	2175 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVNEGQDTE GGSSRAQTLT PPPNPQQQLY DEEDLLRESM DTTEKTFENG FQIQKEQIRQ  60
   61 HLQDSSQRGT AEDAETQKMK QFLDTNELHN MASDSWAMMR EEIMEKRETN RDLNRQLKEK 120
  121 SEELMQKSQI LVETTLKLKA VEEERDKRKK EEQFREADAR SNNYARKGEI SSNIEQKNHQ 180
  181 NIQIMDTRCT TSSSRMNTPA QRIGENLSTS NVGNNVVRET VREYCEETGE ILEDFEVNQN 240
  241 DSVLTERNVT GSVRNGDSQV QTNSLERMTQ MMLAQSLPEP AKFTAEEGSI SIEAFEKTFK 300
  301 LKFGTFSDEQ QVAILESKYL EGRAQKAYRS LTAGEKVKVK VVLNALANRL RLSVEDENHR 360
  361 AKQKWNILSR KPDQSCEDYC LLIDDIARIA FRRVSPEELS SMKYVKLLDE VTDMHLRCSI 420
  421 DNKIMDTDEI NHYDVCREMI IRHEWNVSKI NEKQCLNSKL SEKRGKVQNA ENFVNQNTQN 480
  481 NFKPFSPNKA ADNSRNSWNN NSQNNSAASQ NISREQSWKT ISVPQKHQNP SDRCSDCQQR 540
  541 GWHMFWCSKK SKDNASQKCD ECQQSGWHMA SCFKLKNRAC FRCNEMGHIA WNCPKKNENT 600
  601 SEKEAPVAKV ETIEGVRMKD CLLMVKSEKS ESEVTRSLEK GQIGKANVEI LLDSGASISL 660
  661 MSKNTWEKIV EVNGKSWEQD QIYEELEYKT ARTANNQLFT LLRAVMVEIK MQTKSEVIKF 720
  721 HIGDMDRENV IIGAGHFEQM GIQMNMIIEP RIVRIDEDVE IPPRSCQLVE VNVTGIIREG 780
  781 AYCLITPTMR HVENAVVRLN EQGKAWVRIV NQFKHMLSLK KGEVIGKGET GGFEVLSNKA 840
  841 EQDITVEEVL NDPTLFSEIE TDTNSCEVVK TAETYERFTT ICEHLKRENG DDRKIWDVIE 900
  901 QFQDVFAISD DELGRNSGTE CVIELKEGAE PIRQKPRPIP LALKPEIRKM IQKMLNQKVI 960
  961 RESKSPWSSP VVLVKKKDGS IRMCIDYRKV NKVVKNNAHP LPNIEATLQS LAGKKLYTVF1020
 1021 DMIAGFWQIP LDEKSKEITA FAIGSELFEW NVLPFGLVIS PALFQGTMEE IIGDLLGVCA1080
 1081 FVYVDDLLIA SKDMEQHLQD VKEALTRIRK SGMKLRASKC HIAKKEVEYL GHKVTLDGVE1140
 1141 TQEVKTDKMK QFSRPTNVKE LQSFLGLVGY YRKFILNFAQ IASSLTSLIS AKVAWIWEKE1200
 1201 QEIAFQELKK LVCQTPVLAQ PDVEAALKGD RPFMIYTDAS RKGIGAVLAQ EGPDGQQHPI1260
 1261 AFASKALSPA ETRYHITDLE ALAMMFALRR FKTIIYGTAI TVFTDHKPLI SLLKGSPLAD1320
 1321 RLWRWSIEIL EFDVKIVYLA GKANAVADAL SRGGCPPNEL EEEQTKELTS IVNAIQTELP1380
 1381 DILDSSCWLE RLKGEDEGWK EVIAALEGGK TKGTFKIVGI ESEISLEYYK IVGGVLKNTE1440
 1441 IEEQSRSVVP EKIRTPLLKE LHEGMLAGHF GIKKMWRMVH RKFYWPQMRV CVENCVRTCA1500
 1501 KCLCANDHSK LTSSLTPYRM TFPLEIVACD LMDVGLSVQG NRYILTIIDL FTKYGTAVPI1560
 1561 PDKKAETVLK AFVERWAIGE GRIPLKLLTD QGKEFVNGLF AQFTHMLKIE HITTKGYNSR1620
 1621 ANGAVERFNK TIMHIMKKKT AVPMEWDDQV VYAVYAYNNC VHENTGETPM FLMHGRDVMG1680
 1681 PLEMSGEDAV GINYADMDEY KHLLTQELLK VQKIAKEHAM REQESYKSLF DQKYASKKHR1740
 1741 FPQPGSRVLL EIPSEKLGAQ CPKLVNKWSG PYRVISCSEN SAEITPVLGK RKHILQIPFE1800
 1801 NLRVIPEAMP DILIVTKKGR SKKPEPEIYC DEITVVSENN ENSCFSCRYI CRCALKPCMF1860
 1861 NMTLVPEAHT PSPTQLYRMY CIMEKSGNRK IDPKQLMAMS SRPLPSPLQI TLPDKMMDNL1920
 1921 FKDMIGCSSL WTYVAELGWE NSYNRYVDKL LNENCGDILN GPGTMLILAD GLRLEDLPVS1980
 1981 TKNCFVCTDY DEETLIALQK KCCRERFKMI VLVIPFTIDV ELVDCWNRLI AKISEETKIL2040
 2041 VVSNMTPDEL EDHALLVEFT SILQKCRRVD DGYLEIISLH DRLEAHPRKT LEMTALAGKV2100
 2101 EYWKAVQTRA KEVGMEWKAF ELKRCTSDTP VKNSDCEAST SMKSASTVRT FEDRMVKRGN2160
 2161 HNRVYHHFTP YGRKK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: CE07254

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: