Protein Overview: gi|7494579

General Information:
Name(s) found:	gi\|7494579 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|7494579\|pir\|\|T29959 DNA-directed RNA polymerase II large subunit ama-1 - Caenorhabditis elegans [NCBI NR] [wormpep67.fasta] DNA-directed RNA polymerase II large subunit ama-1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
Organism:	Caenorhabditis elegans
Length:	1862 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVGVDFQA PLRIVSRVQF GILGPEEIKR MSVAHVEFPE VYENGKPKLG GLMDPRQGVI  60
   61 DRRGRCMTCA GNLTDCPGHF GHLELAKPVF HIGFLTKTLK ILRCVCFYCG RLLIDKSAPR 120
  121 VLEILKKTGT NSKKRLTMIY DLCKAKSVCE GAAEKEEGMP DDPDDPMNDG KKVAGGCGRY 180
  181 QPSYRRVGID INAEWKKNVN EDTQERKIML TAERVLEVFQ QITDEDILVI GMDPQFARPE 240
  241 WMICTVLPVP PLAVRPAVVT FGSAKNQDDL THKLSDIIKT NQQLQRNEAN GAAAHVLTDD 300
  301 VRLLQFHVAT LVDNCIPGLP TATQKGGRPL KSIKQRLKGK EGRIRGNLMG KRVDFSARTV 360
  361 ITADPNLPID TVGVPRTIAQ NLTFPEIVTP FNVDKLQELV NRGDTQYPGA KENGARVDLR 420
  421 YHPRAADLHL QPGYRVERHM KDGDIIVFNR QPTLHKMSMM GHRVKILPWS TFRMNLSVTS 480
  481 PYNADFDGDE MNLHLPQSLE TRAEIEEIAM VPRQLITPQA NKPVMGIVQD TLCAVRMMTK 540
  541 RDVFIDWPFM MDLLMYLPTW DGKVPQPAIL KPKPLWTGKQ VFSLIIPGNV NVLRTHSTHP 600
  601 DSEDSGPYKW ISPGDTKVII EHGELLSGIV CSKTVGKSAG NLLHVVTLEL GYEIAANFYS 660
  661 HIQTVINAWL IREGHTIGIG DTIADQATYL DIQNTIRKAK QDVVDVIEKA HNDDLEPTPG 720
  721 NTLRQTFENK VNQILNDARD RTGSSAQKSL SEFNNFKSMV VSGSKGSKIN ISQVIACVGQ 780
  781 QNVEGKRIPF GFRHRTLPHF IKDDYGPESK GFVENSYLAG LTPSEFFFHA MGGREGLIDT 840
  841 AVKTAETGYI QRRLIKAMES VMVNYDGTVR NSLAQMVQLR YGEDGLDGMW VENQNMPTMK 900
  901 PNNAVFERDF RVSVAQNAIK LMDLTDNKFL RKNYSEDVVR EIQESEDGIS LVESEWSQLE 960
  961 EDRRLLRKIF PRGDAKIVLP CNLQRLIWNA QKIFKVDLRK PVNLSPLHVI SGVRELSKKL1020
 1021 IIVSGNDEIS KQAQYNATLL MNILLRSTLC TKNMCTKSKL NSEAFDWLLG EIESRFQQAI1080
 1081 AQPGEMVGAL AAQSLGEPAT QMTLNTFHYA GVSAKNVTLG VPRLKEIINV SKTLKTPSLT1140
 1141 VFLTGAAAKD PEKAKDVLCK LEHTTLKKVT CNTAIYYDPD PKNTVIAEDE EWVSIFYEMP1200
 1201 DHDLSRTSPW LLRIELDRKR MVDKKLTMEM IADRIHGGFG NDVHTIYTDD NAEKLVFRLR1260
 1261 IAGEDKGEAQ EEQVDKMEDD VFLRCIEANM LSDLTLQGIP AISKVYMNQP NTDDKKRIII1320
 1321 TPEGGFKSVA DWILETDGTA LLRVLSERQI DPVRTTSNDI CEIFEVLGIE AVRKAIEREM1380
 1381 DNVISFDGSY VNYRHLALLC DVMTAKGHLM AITRHGINRQ EVGALMRCSF EETVDILMEA1440
 1441 AVHAEEDPVK GVSENIMLGQ LARCGTGCFD LVLDVEKCKY GMEIPQNVVM GGGFYGSFAG1500
 1501 SPSNREFSPA HSPWNSGVTP TYAGAAWSPT TGGMSPGAGF SPAGNTDGGA SPFNEGGWSP1560
 1561 ASPGDPLGAL SPRTPSYGGM SPGVYSPSSP QFSMTSPHYS PTSPSYSPTS PAAGQSPVSP1620
 1621 SYSPTSPSYS PTSPSYSPTS PSYSPTSPSY SPTSPSYSPT SPSYSPSSPS YSPSSPSYSP1680
 1681 SSPRYSPTSP TYSPTSPTYS PTSPTYSPTS PTYSPTSPSY ESGGGYSPSS PKYSPSSPTY1740
 1741 SPTSPSYSPT SPQYSPTSPQ YSPSSPTYTP SSPTYNPTSP RGFSSPQYSP TSPTYSPTSP1800
 1801 SYTPSSPQYS PTSPTYTPSP SEQPGTSAQY SPTSPTYSPS SPTYSPASPS YSPSSPTYDP1860
 1861 NS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: gi|7494579

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: