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Protein Overview: sco-1

General Information:
Name(s) found: sco-1 / CE06743 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00015297 locus:sco-1 status:Partially_confirmed UniProt:Q17557 protein_id:CCD62405.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 312 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: electron transport [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    transport [IEALink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: binding [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRTVSLACS TANLCKNTKP VWTLASAARF SDKNKGDDLE TDLQKDLKKL NEILKTGITE  60
   61 TETTSSPKEP PVDKNFMNFR KQAEQEAFQR SSIFNWKTVL GTFAVGGTCL AALFYIKKIR 120
  121 LDEREKHRKQ TAGKARIGGE WELMNTDGKM EGSQELRGNW LLMYFGFTNC PDICPDEIEK 180
  181 MVKVVEIIEA KKDATPIVPV FISVDPERDS VARVKEYCSE FSNKLRGFTG TTEQVNKVAK 240
  241 TFRVYHSQGP RTNKQEDDYI VDHTVIMYLI DPSGQFHDYY GQNRKAEEIA NVIEMKVLKY 300
  301 QAQNRKSLLN LF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] MSA 1.53898 View MSA. No confident structure predictions are available.
    2 View Details [131..312] PSI-BLAST 33.69897 No description for 2gqkA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.13

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle