YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: cdr-6

General Information:
Name(s) found: cdr-6 / CE06051 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00010471 locus:cdr-6 status:Confirmed UniProt:G5EET3 protein_id:CAA99802.1 [WormBase]
  • pir||T20213 hypothetical protein K01D12.12 - Caenorhabditis elegans [NCBI NR]
  • gi|52352462|gb|AAU43721.1| cadmium-inducible lysosomal protein CDR-6 [Caenorhabditis elegans] [NCBI NR]
  • gi|3875233|emb|CAA99802.1| C. elegans protein K01D12.12, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17562066|ref|NP_506113.1| CaDmium Responsive family member (cdr-6) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE06051 WBGene00010471 locus:cdr-6 glutathione S-transferase status:Confirmed TR:Q18830 protein_id:CAA99802.1 [wormpep150.fasta]
  • 06051 WBGene00010471 glutathione S-transferase status:Confirmed TR:Q18830 protein_id:CAA99802.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein family member, with a transmembrane domain, of ancient origin (5M892) [Caenorhabditis elegans]gi|52352462|gb|AAU43721.1| cadmium-inducible lysosomal protein CDR-6 [Caenorhabditis elegans]gi|3875233|emb|CAA99802.1| Hypothetical protein K [nrdb_11152004_Chlamydomonas]
  • CE06051 WBGene00010471 glutathione S-transferase status:Confirmed TR:Q18830 protein_id:CAA99802.1 [wormpep132.fasta]
  • 06051 WBGene00010471 locus:cdr-6 glutathione S-transferase status:Confirmed TR:Q18830 protein_id:CAA99802.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • glutathione S-transferase status:Partially_confirmed TR:Q18830 protein_id:CAA99802.1 [wormpep115.fasta.reversed]
  • CE06051 Glutathione S-transferases. status:Partially_confirmed TR:Q18830 protein_id:CAA99802.1 [wormpep80.hongbin]
  • CE06051 WBGene00010471 locus:cdr-6 glutathione S-transferase status:Confirmed UniProt:Q18830_CAEEL protein_id:CAA99802.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE06051 WBGene00010471 locus:cdr-6 glutathione S-transferase status:Confirmed UniProt:Q18830_CAEEL protein_id:CAA99802.1| [wormORF-contam.fasta]
  • cadmium-inducible lysosomal protein CDR-6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein K01D12.12 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CaDmium Responsive family member (cdr-6) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE06051 WBGene00010471 locus:cdr-6 glutathione S-transferase status:Confirmed UniProt:Q18830 protein_id:CAA99802.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE06051 WBGene00010471 locus:cdr-6 glutathione S-transferase status:Confirmed UniProt:G5EET3 protein_id:CAA99802.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE06051 WBGene00010471 locus:cdr-6 status:Confirmed UniProt:G5EET3 protein_id:CAA99802.1 glutathione S-transferase [wormpep246-ecoli-contam.fasta]
  • CaDmium Responsive OS=Caenorhabditis elegans GN=cdr-6 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 277 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: determination of adult lifespan [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCCCPVTTT LVVGAIAFFI YKKFFTPPTI KPKPAIHKTD YKKDTVYLYQ FKRLKNCPNL  60
   61 SPFCMKIEIL CRVYNIPYEI VESSMARSRN GTLPFIELNG EHIADSDLIE IRLRQHFKIP 120
  121 SLPTEQEAQS VALSRMADNH LFYVLLRYKS SVDMFYEIIV GLLGLPSAFN AVLVPLVKAV 180
  181 FGSKVYSRCV GAIGDFEPHE LDELLHRDLK VIQDSIKGKF LFGDKITPTD ATVFGQLASV 240
  241 YYPLRSHIND VLEKDFPKIL EYCESVRKEV YPNDFTI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..277] PSI-BLAST 28.0 Class zeta GST

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.630214408223227 bayes_pls_golite062009
  • protein binding
    		•  0.034515546627104 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.45

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle