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Protein Overview: cdr-4

General Information:
Name(s) found: cdr-4 / CE06050 [WormBase]
Description(s) found:
Found 23 descriptions.
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  • WBGene00010470 locus:cdr-4 status:Confirmed UniProt:G5EDZ7 protein_id:CAA99876.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 277 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: positive regulation of growth rate [IMP]
    determination of adult lifespan [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCCCPVTTT LVVGAIAYFI YKKFFTPPTI KPKPAIHKTD YKKDTVYLYQ FKRIKSCPNL  60
   61 SPFCMKLEIL CRAYNIPYEV VETSMSRSRN GTLPFIELNG EHIADSDLIE IRLRQHFKIP 120
  121 SLPDEQEAQS VALSRMADNH LFYILIRYKS ASDSLYNIFG DLFNLPSFLV PVVIPVVRAF 180
  181 FKRKIYYRCV GAIGDFEPQE LDELLHRDLK VIQDSIKGNF LFGDKITPAD ATVFGQLATV 240
  241 YYPIRSHLTD VLDKDFPKVL EYLERVRKEI YPNDFTI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..277] PSI-BLAST 29.30103 Class zeta GST

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.630214408223227 bayes_pls_golite062009
  • protein binding
    		•  0.034515546627104 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.55

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle