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Protein Overview: CE05969

General Information:
Name(s) found: CE05969 [WormBase]
Description(s) found:
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  • WBGene00010148 status:Partially_confirmed UniProt:Q20883 protein_id:CAA93502.1 [WormBase]
  • pir||T22777 hypothetical protein F56D5.3 - Caenorhabditis elegans [NCBI NR]
  • gi|3877704|emb|CAA93502.1| C. elegans protein F56D5.3, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17540738|ref|NP_501657.1| hypothetical protein F56D5.3 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE05969 WBGene00010148 NADH oxidase status:Partially_confirmed TR:Q20883 protein_id:CAA93502.1 [wormpep150.fasta]
  • 05969 WBGene00010148 NADH oxidase status:Partially_confirmed TR:Q20883 protein_id:CAA93502.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • nadh oxidase family member (4K163) [Caenorhabditis elegans]gi|3877704|emb|CAA93502.1| Hypothetical protein F56D5.3 [Caenorhabditis elegans]gi|7504424|pir||T22777 hypothetical protein F56D5.3 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • NADH oxidase status:Partially_confirmed TR:Q20883 protein_id:CAA93502.1 [wormpep115.fasta.reversed]
  • CE05969 NADH oxidase status:Predicted TR:Q20883 protein_id:CAA93502.1 [wormpep80.hongbin]
  • CE05969 WBGene00010148 NADH oxidase status:Partially_confirmed UniProt:Q20883_CAEEL protein_id:CAA93502.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE05969 WBGene00010148 NADH oxidase status:Partially_confirmed UniProt:Q20883_CAEEL protein_id:CAA93502.1| [wormORF-contam.fasta]
  • F56D5.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F56D5.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE05969 WBGene00010148 NADH oxidase status:Partially_confirmed UniProt:Q20883 protein_id:CAA93502.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE05969 WBGene00010148 status:Partially_confirmed UniProt:Q20883 protein_id:CAA93502.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F56D5.3 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 449 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: FMN binding [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRFPHAATV SSKVLGGKLN FPNGITAQNR FMKAAMTERL ATYSLDDFKN HGLPTEQILN  60
   61 IYDKWGHGQF GMIITGNVCV DPINLEAAGN AIIFKEGESS KRRNLFSQWA QKIKQDGSLA 120
  121 IMQLSHAGRQ ASVFVNPTPY GVSDIELKTD PPGSMYGKPI ALTTDQIKTE VVDRFVYAAK 180
  181 FAYECGFDGV QLHGAHGYLL TQFTSPTTNN RNDKYGGSIE NRNRVIIEIY DEIRKEIPET 240
  241 SGFLIGIKTN SKEFQDKGTT VEDAKQMCIE YEKRGFDFVE LTGGTAEKFV FAHQRESTVI 300
  301 REAFFVEFAE TIRPVFKNTV VYLTGGFRTT GAMVDAITRN TTQGIGLGRP ATAEPDLPKK 360
  361 LLNGDVPSAV KDEFNPNDMI KQIMASGSQI EQMARNSVEG AGGNVMDQIT DYSDEKMVAL 420
  421 FTEKAAQLFV DAAKDALAGK IPKNIVIMN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..449] PSI-BLAST 96.221849 The Crystal Structure and Reaction Mechanism of E. coli 2,4-Dienoyl CoA Reductase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  2.36642953353273 bayes_pls_golite062009
  • catalytic activity
    		•  2.31793084876503 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  0.95357258623775 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle