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Protein Overview: CE05727

General Information:
Name(s) found: CE05727 [WormBase]
Description(s) found:
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  • WBGene00009131 status:Confirmed UniProt:Q19789 protein_id:CAA93284.1 [WormBase]
  • pir||T21368 hypothetical protein F25H8.1 - Caenorhabditis elegans [NCBI NR]
  • gi|3876364|emb|CAA93284.1| C. elegans protein F25H8.1a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17539998|ref|NP_501789.1| hypothetical protein F25H8.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE05727 WBGene00009131 Yeast protein 00926 like status:Confirmed TR:Q19789 protein_id:CAA93284.1 [wormpep150.fasta]
  • 05727 WBGene00009131 Yeast protein 00926 like status:Confirmed TR:Q19789 protein_id:CAA93284.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • RNaseIII (4K696) [Caenorhabditis elegans]gi|3876364|emb|CAA93284.1| Hypothetical protein F25H8.1 [Caenorhabditis elegans]gi|7499845|pir||T21368 hypothetical protein F25H8.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • Yeast protein 00926 like status:Confirmed TR:Q19789 protein_id:CAA93284.1 [wormpep115.fasta.reversed]
  • CE05727 Yeast protein 00926 like status:Confirmed TR:Q19789 protein_id:CAA93284.1 [wormpep80.hongbin]
  • CE05727 WBGene00009131 Yeast protein 00926 like status:Confirmed UniProt:Q19789_CAEEL protein_id:CAA93284.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE05727 WBGene00009131 Yeast protein 00926 like status:Confirmed UniProt:Q19789_CAEEL protein_id:CAA93284.1| [wormORF-contam.fasta]
  • F25H8.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F25H8.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE05727 WBGene00009131 Yeast protein 00926 like status:Confirmed UniProt:Q19789 protein_id:CAA93284.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE05727 WBGene00009131 status:Confirmed UniProt:Q19789 protein_id:CAA93284.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F25H8.1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tRNA processing [IEALink to PubMed article]
    Molecular Function: RNA binding [IEALink to PubMed article]
    tRNA methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEETIEKFE DNVEHQNQDQ PVPEGMSKKQ LRRQKYKVKW EEKKLVKRAA ERIRKKEKRA  60
   61 ALKESGDLSK LRKRKDFRTM AQSNSKQRIA LDMSFDDLMI EKDQKRTVQQ IGWCYTANRH 120
  121 SPDPFQFHVV GFDGPSRKIY DGNEHNLNQD IHLHQEKLEN LFKPEEIVYL TSESENVLSD 180
  181 LDDTKVYVIG GIVDHNSQKG LCYRIAQEKG FGHAKLPLDE HLLMKSRRVL TINQVYEILV 240
  241 HYSVHKNWKD ALLSIIPERK NAQLKEEVVE EKPESLEEIG KLDTESTDTA TGSPKIN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] MSA 3.082997 View MSA. No confident structure predictions are available.
    2 View Details [78..297] Pfam 76.113509 No description for PF01746.12 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle