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Protein Overview: del-1

General Information:
Name(s) found: del-1 / CE05547 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00000952 locus:del-1 Degenerin del-1 status:Confirmed UniProt:Q19038 protein_id:CAA91975.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 664 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: ion channel activity [IEALink to PubMed article]
    sodium channel activity [IEALink to PubMed article]
    amiloride-sensitive sodium channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKYIDILK KSKMMLFQDV GKSFEDDSPC KEEAPKTQIQ HSVRDFCEQT TFHGVNMIFT  60
   61 TSLYWVRFLW VVVSLVCICL CMYSFSHVKD KYDRKEKIVN VELVFESAPF PAITVCNLNP 120
  121 FKNHLARSVP EISETLDAFH QAVVYSNDAT MDELSGRGRR SLNDGPSFKY LQYEPVYSDC 180
  181 SCVPGRQECI AQTSAPRTLE NACICNYDRH DGSAWPCYSA QTWEKSICPE CNDIGFCNVP 240
  241 NTTGSGNIPC YCQLEMGYCV FQPESRVRRI WEFQGNKIPE KGSPLRKEYM EQLTQLGYGN 300
  301 MTDQVAITTQ AKEKMILKMS GLHPQRRAAL GYGKSELIKM CSFNGQQCNI DTEFKLHIDP 360
  361 SFGNCYTFNA NPEKKLASSR AGPSYGLRLM MFVNSSDYLP TTEATGVRIA IHGKEECPFP 420
  421 DTFGYSAPTG VISSFGISLR NINRLPQPYG NCLQKDNPQS RSIYKGYKYE PEGCFRSCYQ 480
  481 YRIIAKCGCA DPRYPKPWKR SAWCDSTNTT TLNCLTTEGA KLSTKENQKH CKCIQPCQQD 540
  541 QYTTTYSAAK WPSGSIQTSC DNHSKDCNSY LREHAAMIEI YYEQMSYEIL RESESYSWFN 600
  601 LMADMGGQAG LFLGASIMSV IEFLFFAVRT LGIACKPRRW RQKTELLRAE ELNDAEKGVS 660
  661 TNNN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] FFAS03 3.78 No description for 2qtsA was found.
    2 View Details [209..664] PSI-BLAST 90.045757 No description for 2qtsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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