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Protein Overview: secs-1

General Information:
Name(s) found: secs-1 / CE05531 [WormBase]
Description(s) found:
Found 23 descriptions.
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  • WBGene00008379 locus:secs-1 O-phosphoseryl-tRNA(Sec) selenium transferase status:Partially_confirmed UniProt:Q18953 protein_id:CAA98446.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 481 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular amino acid metabolic process [IEALink to PubMed article]
    Molecular Function: lyase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKANFGKKEG EYSRLVSKSS NKLLNSLWEK KQIPEEGWSE HTLDLFLSWL SSHDTNNRVD  60
   61 MIPVGAGERE GRVLTPLVQR LHSNLTHGIG RSGNLLEIQP KALGSSMLAC LSNEFAKHAL 120
  121 HLLGLHAVKS CIVVPLCTGM SLSLCMTSWR RRRPKAKYVV WLRIDQKSSL KSIYHAGFEP 180
  181 IIVEPIRDRD SLITDVETVN RIIEQRGEEI LCVMTTTSCF APRSPDNVEA ISAICAAHDV 240
  241 PHLVNNAYGL QSEETIRKIA AAHECGRVDA VVQSLDKNFQ VPVGGAVIAA FKQNHIQSIA 300
  301 QSYPGRASSV PSRDLVLTLL YQGQSAFLEP FGKQKQMFLK MRRKLISFAE NIGECVYEVP 360
  361 ENEISSAMTL STIPPAKQTL FGSILFAKGI TGARVVTSSQ SKTTIEGCEF INFGSHTTEQ 420
  421 HGGYLNIACS VGMTDHELEE LFTRLTSSYA KFVRELAKED ERINSSGRRI PINESFDMEN 480
  481 D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..481] PSI-BLAST 58.522879 No description for 2jisA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle