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Protein Overview: cdr-2

General Information:
Name(s) found: cdr-2 / CE05497 [WormBase]
Description(s) found:
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  • WBGene00008296 locus:cdr-2 status:Confirmed UniProt:G5ECX9 protein_id:CAA99803.1 [WormBase]
  • pir||T20214 hypothetical protein C54D10.1 - Caenorhabditis elegans [NCBI NR]
  • gi|52352466|gb|AAU43723.1| cadmium-inducible lysosomal protein CDR-2 [Caenorhabditis elegans] [NCBI NR]
  • gi|3875234|emb|CAA99803.1| C. elegans protein C54D10.1, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17558902|ref|NP_506114.1| CaDmium Responsive family member (cdr-2) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE05497 WBGene00008296 locus:cdr-2 glutathione S-transferase status:Confirmed TR:Q18831 protein_id:CAA99803.1 [wormpep150.fasta]
  • 05497 WBGene00008296 glutathione S-transferase status:Partially_confirmed TR:Q18831 protein_id:CAA99803.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • glutathione S-transferase, C-terminal family member (5M894) [Caenorhabditis elegans]gi|52352466|gb|AAU43723.1| cadmium-inducible lysosomal protein CDR-2 [Caenorhabditis elegans]gi|3875234|emb|CAA99803.1| Hypothetical protein C54D10.1 [Caenorhabditis ele [nrdb_11152004_Chlamydomonas]
  • CE05497 WBGene00008296 glutathione S-transferase status:Partially_confirmed TR:Q18831 protein_id:CAA99803.1 [wormpep132.fasta]
  • 05497 WBGene00008296 locus:cdr-2 glutathione S-transferase status:Confirmed TR:Q18831 protein_id:CAA99803.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE05497 WBGene00008296 glutathione S-transferase status:Confirmed TR:Q18831 protein_id:CAA99803.1 [WormBase_C-elegans_na_01-20-2005_combined_reversed.fasta]
  • glutathione S-transferase status:Partially_confirmed TR:Q18831 protein_id:CAA99803.1 [wormpep115.fasta.reversed]
  • CE05497 Glutathione S-transferases. status:Predicted TR:Q18831 protein_id:CAA99803.1 [wormpep80.hongbin]
  • CE05497 WBGene00008296 locus:cdr-2 glutathione S-transferase status:Confirmed UniProt:Q18831_CAEEL protein_id:CAA99803.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE05497 WBGene00008296 locus:cdr-2 glutathione S-transferase status:Confirmed UniProt:Q18831_CAEEL protein_id:CAA99803.1| [wormORF-contam.fasta]
  • CaDmium Responsive family member (cdr-2) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • cadmium-inducible lysosomal protein CDR-2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C54D10.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE05497 WBGene00008296 locus:cdr-2 glutathione S-transferase status:Confirmed UniProt:Q18831 protein_id:CAA99803.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE05497 WBGene00008296 locus:cdr-2 glutathione S-transferase status:Confirmed UniProt:G5ECX9 protein_id:CAA99803.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE05497 WBGene00008296 locus:cdr-2 status:Confirmed UniProt:G5ECX9 protein_id:CAA99803.1 glutathione S-transferase [wormpep246-ecoli-contam.fasta]
  • CaDmium Responsive OS=Caenorhabditis elegans GN=cdr-2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 278 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: determination of adult lifespan [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCSCTIKAA LIVGAVGFFI YRKMFKKPSI KPKPEAYKKD YKKDTVYLYQ FKRTRKCPNL  60
   61 SPFCIKVEIL CRAYNIPYEI CDDKLRWSRN GSIPFIELNG EHIADTDLIE MRLRRHFNIP 120
  121 SLPAAQEAHS VALTRLADNH LFNLLIRYKI IGDEFFHILV RSIGIPKFLQ PLLFPLIRAS 180
  181 FGKKVYQRST GSIGDFELKE MDDILHRDFQ TIQDYLGDQK FLFGDKVTAA DAAVFGQIAS 240
  241 VIYPFRCSIN DALENDFPKI LEYCERVRQE IYPNDFTI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..278] PSI-BLAST 30.221849 STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.158183295732202 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle