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Protein Overview: CE05266

General Information:
Name(s) found: CE05266 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00007534 status:Confirmed UniProt:Q17935 protein_id:CAA98232.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 589 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGFNPQQAT HTTSLKRERS EDEEYSLPAK RPADDTDLNP FMDDNEAVNE KYPIPESAVG  60
   61 IVIGRGGSEI QGIQAKAGCR VQMSPDADPS SGVRMVTLEG SRSNVETAKH LINEVVARSQ 120
  121 NPRPQYGFPR AQTTIDIAIP PNRCGLIIGK SGDTIRQLQE KSGCKMILVQ DNQSVSDQSK 180
  181 PLRITGDPQK IELAKQLVAE ILNSGGDGNG GSGLQMHHAG GGGGASARGE VVVPRSSVGI 240
  241 IIGKQGDTIK RLAMETGTKI QFKPDDDPST PERCAVIMGT RDQIYRATER ITELVKKSTM 300
  301 QQGGGGNVAG AMVSNEASTF YMSVPAAKCG LVIGKGGETI KQINSESGAH CELSRDPTGN 360
  361 ADEKVFVIKG GKRAIEHAKH LIRIKVGDIA PNTPFRDDSA MTMQTQFSAP AQNNFGGQQQ 420
  421 WNPVAQIPAA AQNPYQVGGW QQNSVYAQQT AAPAAAPYAA AGIVQPQQQV AYQQPQVVQQ 480
  481 VQPATTVAAT TTPTVDPVTG EQDYSAQWME YYKSIGAHDK AEAVEAQMKK KKAEAAARAV 540
  541 VPGGLIQQMP MGMAMPQMSA QARVPTQNYP AYSAAGAAPY QAQQYGQYQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..217] PSI-BLAST 32.39794 No description for 2annA was found.
    2 View Details [218..402] PSI-BLAST 21.39794 Far upstream binding element, FBP, KH3 and KH4 domains
    3 View Details [403..466] deduced N/A No confident structure predictions are available.
    4 View Details [467..589] PSI-BLAST 4.69897 Sec24

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.766407798661875 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.1608635436815 bayes_pls_golite062009
  • RNA binding
    		•  0.0205643208063799 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle