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Protein Overview: CE05235

General Information:
Name(s) found: CE05235 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00007387 locus:jmjd-5 status:Confirmed UniProt:Q17765 protein_id:CAA99769.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 578 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [IMPLink to PubMed article]
    metabolic process [IEALink to PubMed article]
    Molecular Function: N-acetyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYKRLKIDE CRDGVFNIRR KVFIEEQNCP ESMEWDENEE QSSIYFVAFK GDLAVGCVRL  60
   61 RNIEKDLLKL ERVAVLKEFR RRRIASDLIR EALIYAQSES PNSPVYAYAQ VSALQAYVNL 120
  121 GFTVLSKVWI EDGTFIPHQT IFWGTPISID TFLKNQSEKA DPSYEDYDAR SPAMLPKIEA 180
  181 FKQRLEDLDT WNFGILQIHL DDQVVSKLIR NLFSRFSTNV DHFLNGNTEF SKEIVDQSEF 240
  241 LLKLADTKLN TGHFNEVDEN WRKLYSLICF CQSFMMFKQN KYEIAIKIAD KGLCMGRIDE 300
  301 DLVPIRQLAW LIHENLPGVS SDDWIHSSFQ FNTTNTYPAL IPLSNSKSID ECDEDDENSF 360
  361 EKLISAVQNN TPLIVRRHSS NMPAIEKWSF PFLLQELHSR TFPVEIGTKY SDENWSQKLM 420
  421 TFKEFIRNSE NERLYLAQHR LFDQVPHLKR DVIIPDVCFG ESSNPENVDM NMWIGPQDTV 480
  481 SPLHTDPRKN MFVQVHGTKL FRMVAPESSE SVYPFDGILS NTSQVDVENP DLKIFPNFEQ 540
  541 VEVLDAVINP GDAIFIPEKW WHFVRSTSPS ISISFWFD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..299] PSI-BLAST 14.30103 No description for 2ozgA was found.
    2 View Details [300..578] PSI-BLAST 45.522879 Hypoxia-inducible factor HIF ihhibitor (FIH1)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle