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Protein Overview: glb-23

General Information:
Name(s) found: glb-23 / CE04843 [WormBase]
Description(s) found:
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  • WBGene00020045 locus:glb-23 status:Partially_confirmed UniProt:Q21978 protein_id:CCD67155.1 [WormBase]
  • pir||T16741 hypothetical protein R13A1.8 - Caenorhabditis elegans [NCBI NR]
  • gi|17541936|ref|NP_501142.1| GLoBin family member (glb-23) [Caenorhabditis elegans] [NCBI NR]
  • gi|1065933|gb|AAA81477.1| Globin protein 23, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE04843 WBGene00020045 status:Partially_confirmed TR:Q21978 protein_id:AAA81477.1 [wormpep150.fasta]
  • 04843 WBGene00020045 status:Partially_confirmed TR:Q21978 protein_id:AAA81477.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • globin (4H982) [Caenorhabditis elegans]gi|1065933|gb|AAA81477.1| Hypothetical protein R13A1.8 [Caenorhabditis elegans]gi|7506704|pir||T16741 hypothetical protein R13A1.8 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q21978 protein_id:AAA81477.1 [wormpep115.fasta.reversed]
  • CE04843 status:Predicted TR:Q21978 protein_id:AAA81477.1 [wormpep80.hongbin]
  • CE04843 WBGene00020045 locus:glb-23 status:Partially_confirmed UniProt:Q21978_CAEEL protein_id:AAA81477.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04843 WBGene00020045 locus:glb-23 status:Partially_confirmed UniProt:Q21978_CAEEL protein_id:AAA81477.1| [wormORF-contam.fasta]
  • R13A1.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein R13A1.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE04843 WBGene00020045 locus:glb-23 status:Partially_confirmed UniProt:Q21978 protein_id:AAA81477.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04843 WBGene00020045 locus:glb-23 status:Partially_confirmed UniProt:Q21978 protein_id:CCD67155.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • GLoBin related OS=Caenorhabditis elegans GN=glb-23 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 342 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxygen transport [IEALink to PubMed article]
    Molecular Function: oxygen binding [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSHPGVTS TSSKSTKGKL GRQRRLSDPS QNQNVKNCHM PTGSSSNNTS STTPPTIQIN  60
   61 GKESFDEFEH GQLRAKSAST DFSSLRSTSS TSSYQKPQKN SASERRKIFL SSSTNQDFMA 120
  121 RSLDDSMTAK MSCMIRTKSH SPLKQMRTYS FRSIPSEENL IDKESCEVVA DSWRLVESRS 180
  181 SAAETSACFG LFVFQRVFSK IPMLRPLFGL SESDDVFDLP DNHPVRRHAR LFTSILHISV 240
  241 KNVDELEAQV APTVFKYGER HYRPDITPHM TEENVRVFCA QIVCTVFDFL RDTEATPKCA 300
  301 ESWIELMRYL GQKLLDGFDF AKLTAERKIS INRNDHHLFL ML

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] deduced N/A No confident structure predictions are available.
    2 View Details [160..342] PSI-BLAST 41.69897 Hemoglobin, beta-chain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle