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Protein Overview: glb-16

General Information:
Name(s) found: glb-16 / CE04582 [WormBase]
Description(s) found:
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  • WBGene00018486 locus:glb-16 status:Confirmed UniProt:Q9GYP4 protein_id:CCD71296.1 [WormBase]
  • gi|9802936|gb|AAF99945.1| Hypothetical protein F46C8.7 [Caenorhabditis elegans] [NCBI NR]
  • pir||T34268 hypothetical protein F46C8.7 - Caenorhabditis elegans [NCBI NR]
  • gi|17567747|ref|NP_509275.1| GLoBin family member (glb-16) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE04582 WBGene00018486 status:Confirmed TR:Q9GYP4 protein_id:AAF99945.1 [wormpep150.fasta]
  • 04582 WBGene00018486 status:Confirmed TR:Q9GYP4 protein_id:AAF99945.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein family member (35.4 kD) (XI158) [Caenorhabditis elegans]gi|9802936|gb|AAF99945.1| Hypothetical protein F46C8.7 [Caenorhabditis elegans]gi|7503561|pir||T34268 hypothetical protein F46C8.7 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Confirmed TR:Q9GYP4 protein_id:AAF99945.1 [wormpep115.fasta.reversed]
  • CE04582 status:Predicted TR:Q9GYP4 protein_id:AAF99945.1 [wormpep80.hongbin]
  • CE04582 WBGene00018486 locus:glb-16 status:Confirmed UniProt:Q9GYP4_CAEEL protein_id:AAF99945.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04582 WBGene00018486 locus:glb-16 status:Confirmed UniProt:Q9GYP4_CAEEL protein_id:AAF99945.1| [wormORF-contam.fasta]
  • Hypothetical protein F46C8.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F46C8.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE04582 WBGene00018486 locus:glb-16 status:Confirmed UniProt:Q9GYP4 protein_id:AAF99945.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04582 WBGene00018486 locus:glb-16 status:Confirmed UniProt:Q9GYP4 protein_id:CCD71296.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 322 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipid storage [IMP]
    body morphogenesis [IMP]
    Molecular Function: iron ion binding [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSVSSSRTV RKKTGGGSVD SNMEDGKQAR KSSSMPSIYD LQQQAAPPTP ALKHYIYDTR  60
   61 LSKIQKRAIR FTWHRLQTRN GGKRVENVFE EVFDKLVKNL PNIRDMFSTR MFLCAMSRGT 120
  121 TSTLRDHSKN CVKMIDSVIK NFDVEKSKRT DTSSENDPRV IGRAHSILKP YGLAGNYWEK 180
  181 FGEVMIDVVL AQEAVRDLPG AGQAWVIFTA CLVDQMRAGF DENRKTDHEA QMKKNTVLHH 240
  241 ATQQLLEDNV ASTSATTASS GNGECSSSNQ PSTSSNQPLA CPFARMSLTP KDARVIESLS 300
  301 GSGGSGSSGN GDISDLSGTI YL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..322] PSI-BLAST 49.0 Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.52421953607929 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle