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Protein Overview: rps-8

General Information:
Name(s) found: rps-8 / CE04561 [WormBase]
Description(s) found:
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  • WBGene00004477 locus:rps-8 40S ribosomal protein S8 status:Confirmed UniProt:P48156 protein_id:CCD63349.1 [WormBase]
  • pir||T16343 hypothetical protein F42C5.8 - Caenorhabditis elegans [NCBI NR]
  • gi|17542014|ref|NP_501167.1| Ribosomal Protein, Small subunit family member (rps-8) [Caenorhabditis elegans] [NCBI NR]
  • gi|1351011|sp|P48156.1|RS8_CAEEL RecName: Full=40S ribosomal protein S8 [NCBI NR]
  • gi|1065942|gb|AAA81485.1| Ribosomal protein, small subunit protein 8 [Caenorhabditis elegans] [NCBI NR]
  • 40S ribosomal protein S8 OS=Caenorhabditis elegans GN=rps-8 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE04561 WBGene00004477 locus:rps-8 40S ribosomal protein S8 status:Confirmed SW:P48156 protein_id:AAA81485.1 [wormpep150.fasta]
  • 04561 WBGene00004477 locus:rps-8 40S ribosomal protein S8 status:Confirmed SW:P48156 protein_id:AAA81485.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • ribosomal Protein, Small subunit (23.8 kD) (rps-8) [Caenorhabditis elegans]gi|1065942|gb|AAA81485.1| Ribosomal protein, small subunit protein 8 [Caenorhabditis elegans]gi|7440242|pir||T16343 hypothetical protein F42C5.8 - Caenorhabditis elegansgi|13510 [nrdb_11152004_Chlamydomonas]
  • locus:rps-8 40S ribosomal protein S8 status:Confirmed SW:P48156 protein_id:AAA81485.1 [wormpep115.fasta.reversed]
  • CE04561 locus:rps-8 40S ribosomal protein S8 status:Confirmed [wormpep80.hongbin]
  • CE04561 WBGene00004477 locus:rps-8 40S ribosomal protein S8 status:Confirmed UniProt:RS8_CAEEL protein_id:AAA81485.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04561 WBGene00004477 locus:rps-8 40S ribosomal protein S8 status:Confirmed UniProt:RS8_CAEEL protein_id:AAA81485.1| [wormORF-contam.fasta]
  • Ribosomal Protein, Small subunit family member (rps-8) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Ribosomal protein, small subunit protein 8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • 40S ribosomal protein S8 [nr-271106-contam.fasta]
  • CE04561 WBGene00004477 locus:rps-8 40S ribosomal protein S8 status:Confirmed UniProt:P48156 protein_id:AAA81485.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04561 WBGene00004477 locus:rps-8 40S ribosomal protein S8 status:Confirmed UniProt:P48156 protein_id:CCD63349.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE04561 WBGene00004477 locus:rps-8 status:Confirmed UniProt:P48156 protein_id:CCD63349.1 40S ribosomal protein S8 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 208 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: structural constituent of ribosome [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGISRDSWHK RYKTGATQPV PHKKRKFELG RPAANTKIGA HRVRLVRTRG GNEKYRALRL  60
   61 DSGNFSWASE QTTRKTRIVD TMYNATNNEL VRTKTLVKGA IISVDAAPFR QWYEAHYALP 120
  121 LARKKNAKLS EEDNAILNKK RSHHTMKKYT ERQKTAAVDA LLIEQFNTGR LLARISSSPG 180
  181 QVGQANGYIL EGKELDFYLR KIRAKKAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] Pfam 104.070581 No description for PF01201.13 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle