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Protein Overview: chtl-1

General Information:
Name(s) found: chtl-1 / CE04499 [WormBase]
Description(s) found:
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  • WBGene00018037 locus:chtl-1 Choline transporter-like protein 1 status:Partially_confirmed UniProt:Q20026 protein_id:CCD62786.1 [WormBase]
  • pir||T16254 hypothetical protein F35C8.7 - Caenorhabditis elegans [NCBI NR]
  • gi|74964260|sp|Q20026.1|CTL1L_CAEEL RecName: Full=Choline transporter-like protein 1 [NCBI NR]
  • gi|32566439|ref|NP_741789.2| CHoline Transporter-Like family member (chtl-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|1072187|gb|AAA81709.1| Choline transporter-like protein 1, isoform a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • Choline transporter-like protein 1 OS=Caenorhabditis elegans GN=chtl-1 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE04499 WBGene00018037 status:Partially_confirmed TR:Q20026 protein_id:AAA81709.1 [wormpep150.fasta]
  • 04499 WBGene00018037 status:Partially_confirmed TR:Q20026 protein_id:AAA81709.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • choline transporter-like protein 2 (XF974) [Caenorhabditis elegans]gi|1072187|gb|AAA81709.1| Hypothetical protein F35C8.7a [Caenorhabditis elegans]gi|7500487|pir||T16254 hypothetical protein F35C8.7 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q20026 protein_id:AAA81709.1 [wormpep115.fasta.reversed]
  • CE04499 status:Partially_confirmed TR:Q20026 protein_id:AAA81709.1 [wormpep80.hongbin]
  • CE04499 WBGene00018037 locus:chtl-1 status:Partially_confirmed UniProt:Q20026_CAEEL protein_id:AAA81709.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04499 WBGene00018037 locus:chtl-1 status:Partially_confirmed UniProt:Q20026_CAEEL protein_id:AAA81709.1| [wormORF-contam.fasta]
  • Hypothetical protein F35C8.7a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F35C8.7a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE04499 WBGene00018037 locus:chtl-1 status:Partially_confirmed TR:Q20026 protein_id:AAA81709.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE04499 WBGene00018037 locus:chtl-1 status:Partially_confirmed UniProt:Q20026 protein_id:AAA81709.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04499 WBGene00018037 locus:chtl-1 status:Partially_confirmed UniProt:Q20026 protein_id:CCD62786.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE04499 WBGene00018037 locus:chtl-1 status:Partially_confirmed UniProt:Q20026 protein_id:CCD62786.1 Choline transporter-like protein 1 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 771 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: collagen and cuticulin-based cuticle development [IMP]
    hermaphrodite genitalia development [IMP]
    nematode larval development [IMP]
    morphogenesis of an epithelium [IMP]
    growth [IMP]
    reproduction [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRKKHRTIP AVEVYEKSDG FPMPTAPPMS PSRMDGVYPS HHVPPLHQAY HVQPASANHV  60
   61 PDQIARFNVI KPDRLAKRHN PQLYTKRGCT DVFCCFLFFV FLCGWVVVAG FGIMWGDPQR 120
  121 LIYPTDSEFR RCGVNLEGSY NFSKRPYLFY FDLTKCISYA TALGGCQTTQ LCVKECPSTY 180
  181 FSYLQLRTAS VSEIQNKMKS VVYCTDDVDK TTVTTFQALQ NLVQRGKCVS YTVKSVPVLQ 240
  241 RCFPEAIFNA VDNVNNVLNS SNSLDYLKRT FGDDALIPQD IQITGQSSEV MKSVVEDQPV 300
  301 THKVIHDLSQ TWWQTLILIF AAGILSFIWT VIMRLLGSLI IWLSILIVLV ALGFGAGFSW 360
  361 LKWNTLKTTG AIDDYSFHPA FDAYFEMPTT WLVVAIATSV LLLIFLLVIL FIRQRISIAC 420
  421 ALISESSKAI GSMMSTLLFP LFPFLLHIGV FALWGSIAIW LASSGQEVCR LKETNGQVYN 480
  481 TSTKCDCTAK VTGCTYVGIE KESETIFWLQ VYNLFAFFWL SCFVTALGDI ALAGAFASYY 540
  541 WARDKRHDVP TFPVIRALNR AIRYNLGSIA FGSLIIAIVK IIRVLLEYID HKLGKSQNKA 600
  601 VKWFLMCLKC CFWCLEVFFK FLTKNAYIMI AIYGKNFFSS AKDSFLLITR NIVRTVVVHK 660
  661 VAGILLFLGK SMITLGMGIL SFYYFSGRWV VEGVPKVDLY YYFVPIVIVV IGSYFMADLF 720
  721 FDVYEMAVDT TFICFLEDSE QNDGSLERPF FMSEKLLEIL GNKNDIPLHS K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] MSA 2.052995 View MSA. No confident structure predictions are available.
    2 View Details [80..244] MSA 4.070993 View MSA. No confident structure predictions are available.
    3 View Details [245..339] deduced N/A No confident structure predictions are available.
    4 View Details [340..485] MSA 4.143994 View MSA. No confident structure predictions are available.
    5 View Details [486..597] MSA 1.142995 View MSA. No confident structure predictions are available.
    6 View Details [598..771] MSA 3.133972 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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