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Protein Overview: CE04306

General Information:
Name(s) found: CE04306 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00017075 locus:nap-1 status:Confirmed UniProt:Q19007 protein_id:CCD68513.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 316 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    nucleosome assembly [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQEHIDAG LLSTNFDMIQ ALPLNVKQRV CALKNLQMKT IQIESDFYKR VHELEIEFEG  60
   61 KFKSTFDQRK AIVAGEVEPT KEQIDTPILE GLEGDQLAEL YKAAEADPSA KGIKDFWLTA 120
  121 LRTHDLVAEA IEEHDVPILS YLTDVTTAAS KDPAGFKIEF HFATNPYFKN QVLTKTYLLG 180
  181 FDPDAEAPLQ FDGPHVIRAV GDTIEWEDGK NVTKKAVKKK QKKGANAGKF LTKTVKADSF 240
  241 FNFFEPPKSK DERNEDEDDE QAEEFLELDY EMGQAIRDTI IPRAVLFYTG ELQSDDMFDF 300
  301 PGEDGDDVSD FSDDEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..316] PSI-BLAST 56.69897 The structure of nucleosome assembly protein suggests a mechanism for histone binding and shuttling

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • histone binding
    		•  2.90325410422425 bayes_pls_golite062009
  • binding
    		•  1.13691501614819 bayes_pls_golite062009
  • protein binding
    		•  0.76850678962668 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle