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Protein Overview: cap-1

General Information:
Name(s) found: cap-1 / CE04295 [WormBase]
Description(s) found:
Found 24 descriptions.
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  • WBGene00000292 locus:cap-1 F-actin-capping protein subunit alpha status:Confirmed UniProt:P34685 protein_id:CCD63359.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 282 amino acids

    Gene Ontology:
    Cellular Component: F-actin capping protein complex [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    actin cytoskeleton organization [IEALink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: actin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEISDAEKV RIASDFIKHA PPGEFNEVFN SVRMLLENDD LLKNKCVNAI AQYNVGQFVP  60
   61 VKLDGVAKQT LITPYNDLGN GRFYDEVSKK SFKYDHVRKE AADLQPHPAE SGITEQWRQA 120
  121 LQTQLDIYID DHYAKSGTGV VFARNGVFTI CIESHQFQPK NFCNGRWRSE WNVPVGDGKS 180
  181 GSQEMKGKIL SQVHYYEDGN VQLFSEKEPV LKVNVSADFD KTAKEIIHAI SEEETIYQNA 240
  241 VQENYANMSD TTFKALRRQL PVTRAKMDWN KAQTYRIGQE MK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..282] PSI-BLAST 127.0 Capz alpha-1 subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  6.56144513012007 bayes_pls_golite062009
  • actin filament binding
    		•  5.39928513902709 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  5.10504476256679 bayes_pls_golite062009
  • binding
    		•  2.03345990933192 bayes_pls_golite062009
  • protein binding
    		•  1.31870344025745 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle