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Protein Overview: dim-1

General Information:
Name(s) found: dim-1 / CE04038 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00001000 locus:dim-1 Disorganized muscle protein 1 status:Confirmed UniProt:Q18066 protein_id:CCD65067.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 324 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDGKAPHFP QQPVARQNDD GSLELECFVD ANPTPQVKWY YDNKEVENSG RFSANLANKG  60
   61 SDSYSAILTI KELADADAGA YRCAIVNPHG KGNANFNLKL TGFSSPTFVE KPQISSRDDG 120
  121 QVMVMEFRAK SILEPTFVWQ KLVGGGAEEI IANSDRIKAV KKLEAGNVYY SALEIKEPTK 180
  181 DKDAGQFICT VKNESGKLTA TFTVKFEVPE GAPSFTRKPQ ILQQTSAGGE PAICFDIGYS 240
  241 ARMNPQVTWI SPKSKKMKES SRIKFKTNDE GNGNFTAQLE LTNYKAKDSG TYTCNIKNDA 300
  301 GEANVELTLN IEGPLDDYAD DSEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..324] PSI-BLAST 43.522879 Crystal Structure of the Ig 1-2-3 fragment of NCAM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.483195558859675 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle