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Protein Overview: tag-320

General Information:
Name(s) found: tag-320 / CE03880 [WormBase]
Description(s) found:
Found 23 descriptions.
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  • WBGene00015168 locus:pdi-6 Probable protein disulfide-isomerase A6 status:Confirmed UniProt:Q11067 protein_id:CCD61843.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 440 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    glycerol ether metabolic process [IEALink to PubMed article]
    cell redox homeostasis [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: protein disulfide oxidoreductase activity [IEALink to PubMed article]
    electron carrier activity [IEALink to PubMed article]
    isomerase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALIKLLLAS LAITSVCGMY SKKDDVVELT EANFQSKVIN SDDIWIVEFY APWCGHCKSL  60
   61 VPEYKKAASA LKGVAKVGAV DMTQHQSVGG PYNVQGFPTL KIFGADKKKP TDYNGQRTAQ 120
  121 AIADSVLAEA KKAVSARLGG KSSGSSSSGS GSGSGKRGGG GSGNEVVELT DANFEDLVLN 180
  181 SKDIWLVEFF APWCGHCKSL EPQWKAAASE LKGKVRLGAL DATVHTVVAN KFAIRGFPTI 240
  241 KYFAPGSDVS DAQDYDGGRQ SSDIVAWASA RAQENMPAPE VFEGINQQVV EDACKEKQLC 300
  301 IFAFLPHILD CQSECRNNYL AMLKEQSEKF KKNLWGWIWV EGAAQPALEE SFEVGGFGYP 360
  361 AMTALNFRKN KYAVLKGSFG KDGIHEFLRD LSYGKGRTSS LRGDGFPKIQ KTEKWDGKDG 420
  421 ALPAEDDIDL SDIDLDKTEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..137] PSI-BLAST 30.522879 No description for 2dmlA was found.
    2 View Details [138..277] PSI-BLAST 26.522879 The solution structure of the second thioredoxin-like domain of human Protein disulfide-isomerase A6
    3 View Details [278..440] PSI-BLAST 13.221849 No description for 2djkA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • protein disulfide isomerase activity
    		•  4.54149370439152 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, transposing S-S bonds
    		•  4.54149370439152 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting keto- and enol-groups
    		•  4.32416700334664 bayes_pls_golite062009
  • disulfide oxidoreductase activity
    		•  1.07184913651636 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  0.858243161645005 bayes_pls_golite062009
  • catalytic activity
    		•  0.672192331361968 bayes_pls_golite062009
  • protein disulfide oxidoreductase activity
    		•  0.44918717550973 bayes_pls_golite062009
  • binding
    		•  0.235855919597681 bayes_pls_golite062009
  • protein binding
    		•  0.157273259994554 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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