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Protein Overview: rnh-1.2

General Information:
Name(s) found: rnh-1.2 / CE03839 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00014163 locus:rnh-1.2 status:Partially_confirmed UniProt:Q23676 protein_id:CAA90146.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 404 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    ribonuclease H activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRRYREVYT DGSTVNNGKR GARGGWAIVF PFDRSLDEYD FMKVGKQTNN VYELTAIYEA  60
   61 TEVVRCWDSF KCNQKLEFVR LKNTITPTTS SILIPCTRRT VSPNGSTDGT NMGGLRITPG 120
  121 ILSKISRSFV PSTAISESLD VKIEYVKGHH TNFFNCEADR LAKKACRSNI NQYNRYLKNK 180
  181 SNICTFSSCF LVCYCVVVFT FMRHEFFDEI HINLQTETEY QSSLDFIDIR NCVLYLICTF 240
  241 PSLEITLDKA SYCPGDYVTA TVLVDNQKPF DARSVMLTIR GTFCYETYFK RSAIVWTSKD 300
  301 GKNKLPVELL EKSFEFQIPT GSRLTYKAGH IKYTMSLEVD RPWKTNLKVK KEVIVARKLD 360
  361 VDEVYFTENK TVSNKPAIGV FQMGSSTSRL PPHVLLFVRD KMSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..224] PSI-BLAST 51.39794 STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
    2 View Details [225..404] PSI-BLAST 10.221849 No description for 2fauA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.48

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle