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Protein Overview: CE01872

General Information:
Name(s) found: CE01872 [WormBase]
Description(s) found:
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  • WBGene00016978 Uncharacterized protein C56G2.3 status:Partially_confirmed UniProt:Q09287 protein_id:CCD66335.1 [WormBase]
  • pir||T15869 hypothetical protein C56G2.3 - Caenorhabditis elegans [NCBI NR]
  • gi|726415|gb|AAA64330.1| Hypothetical protein C56G2.3 [Caenorhabditis elegans] [NCBI NR]
  • gi|2496934|sp|Q09287.1|YQK3_CAEEL RecName: Full=Uncharacterized protein C56G2.3 [NCBI NR]
  • gi|17552690|ref|NP_498388.1| hypothetical protein C56G2.3 [Caenorhabditis elegans] [NCBI NR]
  • Uncharacterized protein C56G2.3 OS=Caenorhabditis elegans GN=C56G2.3 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE01872 WBGene00016978 status:Partially_confirmed SW:Q09287 protein_id:AAA64330.1 [wormpep150.fasta]
  • 01872 WBGene00016978 status:Partially_confirmed SW:Q09287 protein_id:AAA64330.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein, with a coiled coil-4 domain, of bilaterial origin (3H435) [Caenorhabditis elegans]gi|726415|gb|AAA64330.1| Hypothetical protein C56G2.3 [Caenorhabditis elegans]gi|7498032|pir||T15869 hypothetical protein C56G2.3 - Caenorhabditis elegan [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed SW:Q09287 protein_id:AAA64330.1 [wormpep115.fasta.reversed]
  • CE01872 status:Partially_confirmed SW:Q09287 protein_id:AAA64330.1 [wormpep80.hongbin]
  • CE01872 WBGene00016978 status:Partially_confirmed UniProt:YQK3_CAEEL protein_id:AAA64330.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE01872 WBGene00016978 status:Partially_confirmed UniProt:YQK3_CAEEL protein_id:AAA64330.1| [wormORF-contam.fasta]
  • C56G2.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C56G2.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C56G2.3 [nr-271106-contam.fasta]
  • CE01872 WBGene00016978 status:Partially_confirmed UniProt:Q09287 protein_id:AAA64330.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE01872 WBGene00016978 status:Partially_confirmed UniProt:Q09287 protein_id:CCD66335.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE01872 WBGene00016978 status:Partially_confirmed UniProt:Q09287 protein_id:CCD66335.1 Uncharacterized protein C56G2.3 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 318 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tRNA processing [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    Molecular Function: RNA binding [IEALink to PubMed article]
    tRNA methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDEAWKQTL ICESINDKIG YWEYLAVTDK RRRSRNKAQS SGAENYKKVL EEQQRIYTAG  60
   61 GMGYGPEMYQ VISNPMRNQK RVNNIEGSKI FAAMNSGAPR IALDIQYVEE MNKRDSGELG 120
  121 NQMQYTISEN FSAKSPFVLD FVNSPSKEFL EQWLSKSVGY YTGNYINQTI LPDFSTKGIK 180
  181 EFYGKSANTI YISSNARDVL DGPLTADVIG ICVTMGRKRE ALSAARRANI RAYRLPIHRY 240
  241 VKWKSGPQYL PFPNIMNVLR EVYMNGGDWS RALHNNISKR HLVNADDDEQ KKMQMLRRRA 300
  301 REEERRELTE AIMSATKG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] MSA 4.076997 View MSA. No confident structure predictions are available.
    2 View Details [96..186] deduced N/A No confident structure predictions are available.
    3 View Details [187..318] MSA 6.083982 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle