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Protein Overview: CE01669

General Information:
Name(s) found: CE01669 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00011791 status:Partially_confirmed UniProt:Q09995 protein_id:CAA87419.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 554 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: transcription [IEALink to PubMed article]
    RNA polyadenylation [IEALink to PubMed article]
    Molecular Function: nucleotidyltransferase activity [IEALink to PubMed article]
    RNA binding [IEALink to PubMed article]
    polynucleotide adenylyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSVNNATSS TPIFGVSQPI STAFPKANDV ALTSSLQSSL EEFKSFESKQ ETLLRIKVLK  60
   61 NLDGLVKDWV QKTTISRIPK DQMFNAGGKL IPFGSYRLGV HSSGADIDSI VVAPRHITRS 120
  121 DFFNSFKDIL AKNPEVTELC AVEKAFVPIM TLKYSGVDID ILFARLALKS VPEDLNILDD 180
  181 SLLKNLDEES VRSLNGCRVA EQLLKLVPHQ KNFCITLRAI KLWAKNHGIY SNSMGFFGGI 240
  241 TWAILVARIC QLYPNAAPSR LIQKVFFIFS TWNWPAPVLL DYINCDRTDL AQLNQLVWDP 300
  301 RRNHADRYHL MPIITPAFPQ QNSTHNVSRS SMKVIQDEMK KALIICDKIH EGTLEWRDLL 360
  361 EEINFFSKYH HFIALKLKAE SVKEELAFGG FFESRIRQLV QILEKNQVIQ VAQINPRKFK 420
  421 DVKDPKKSIW FIGLEFVANV KNVDLTSDIQ QFKMNIDRQS MSVKEIAAGC QVETDFTYEK 480
  481 RSNLINIISK KDLSCQRIMK KTEVSVPVTK DSRNLKRHIL DEAPTVQKKH KLDVLEKSTV 540
  541 DSLLSTLKKN TSHA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..554] PSI-BLAST 140.0 Crystal structure of poly(A) polymerase in complex with 3'-dATP and magnesium chloride

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.122769147009 bayes_pls_golite062009
  • RNA binding
    		•  1.07207584601969 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.92178707322923 bayes_pls_golite062009
  • polynucleotide adenylyltransferase activity
    		•  0.911825870004661 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.667889614569279 bayes_pls_golite062009
  • transferase activity
    		•  0.63270331673446 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.51

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle