YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE01545

General Information:
Name(s) found: CE01545 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00008640 status:Partially_confirmed UniProt:Q09534 protein_id:CAA88310.1 [WormBase]
  • pir||T20690 hypothetical protein F10B5.3 - Caenorhabditis elegans [NCBI NR]
  • gi|3875711|emb|CAA88310.1| C. elegans protein F10B5.3, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17533041|ref|NP_495709.1| hypothetical protein F10B5.3 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE01545 WBGene00008640 Zinc finger, C2H2 type status:Partially_confirmed TR:Q09534 protein_id:CAA88310.1 [wormpep150.fasta]
  • 01545 WBGene00008640 Zinc finger, C2H2 type status:Partially_confirmed TR:Q09534 protein_id:CAA88310.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • zinc finger protein REF-2 family member (51.8 kD) (2I438) [Caenorhabditis elegans]gi|3875711|emb|CAA88310.1| Hypothetical protein F10B5.3 [Caenorhabditis elegans]gi|7498789|pir||T20690 hypothetical protein F10B5.3 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • Zinc finger, C2H2 type status:Partially_confirmed TR:Q09534 protein_id:CAA88310.1 [wormpep115.fasta.reversed]
  • CE01545 Zinc finger, C2H2 type status:Predicted TR:Q09534 protein_id:CAA88310.1 [wormpep80.hongbin]
  • CE01545 WBGene00008640 Zinc finger, C2H2 type status:Partially_confirmed UniProt:Q09534_CAEEL protein_id:CAA88310.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE01545 WBGene00008640 Zinc finger, C2H2 type status:Partially_confirmed UniProt:Q09534_CAEEL protein_id:CAA88310.1| [wormORF-contam.fasta]
  • Hypothetical protein F10B5.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F10B5.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE01545 WBGene00008640 Zinc finger, C2H2 type status:Partially_confirmed UniProt:Q09534 protein_id:CAA88310.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE01545 WBGene00008640 status:Partially_confirmed UniProt:Q09534 protein_id:CAA88310.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F10B5.3 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 471 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: gamete generation [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEDNQSPSP SESSIKTDYD AKIRVLYSTK NNKSEEESVF AHRLVLSTFS PLFQQLLQDA  60
   61 TSSSTSTTSS TSSDDVISIS LDLTAFPNAL AAFKVILEAL YTGDIKMKSV AANEVLAVSR 120
  121 HCQISSLEPK IMSAVAPLPL NLANILNCSQ SVPLNSNPFL QYTSPPIQNY LSSMISLWSN 180
  181 PFFSALFGNT TGTPSLPFSP QSDTENSRTQ SEGSSPRANS TSTPPTTDLE KIVPNDDKEG 240
  241 WCRNKKYIEK VDGGFMCTVC RKIYGRYNSV SYHVTIYHRN PPIKCEENGC NFSTREARYI 300
  301 HFHKYYRHHI PLPENIDLGS RKCPFCRHVS KSPAMLEKHI ARHETDGTSG GTPGALKRAQ 360
  361 SKKKIVPTMT TDVIDPNVSS IFAPTNPAGN IPIQCSLCPF STHSTDLLFI HLAMQHAQEL 420
  421 AQCSGLLADN SSETSTSSSS DGEPMITDID LDVKPLIDQS LMLHLNTPLS N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] FFAS03 5.93 Crystal Structure of the B-Cell Lymphoma 6 (BCL6) BTB domain to 2.2 Angstrom
    2 View Details [143..347] PSI-BLAST 54.39794 No description for 2i13A was found.
    3 View Details [348..471] MSA 6.355992 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.625489610856567 bayes_pls_golite062009
  • protein binding
    		•  0.362846736233819 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle