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Protein Overview: ttll-12

General Information:
Name(s) found: ttll-12 / CE01535 [WormBase]
Description(s) found:
Found 24 descriptions.
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  • WBGene00008405 locus:ttll-12 Tubulin--tyrosine ligase-like protein 12 status:Confirmed UniProt:Q09512 protein_id:CAA87778.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 662 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: protein modification process [IEALink to PubMed article]
    Molecular Function: tubulin-tyrosine ligase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDRSAYPF STFLDQHSGQ LNASDVPPEL WHSLYKKLSD QTFDAGDHFQ IICEMNEDDE  60
   61 KTLFVRALED LHNNDEDNIF LIDHFMSFSS ESARKCVEST EGLVERLAGL FGIDTDSTEE 120
  121 VDETVEKIET SVEKEEAEHA KKISSETGNL PRHESVDARL SSYSVDDPKN ELTEKVLKAL 180
  181 WKYSQTYSVS YQLDNGEIEK KSVWYVMDDF GTRVRHSTEP NVRIVPLMFL PQNCAYSIMF 240
  241 LTKPVNTDEE IMMDWASNVI TAQHPEWRKY IEQPWAAQDF SKETMIPDAP TLEYFTSGRN 300
  301 PDFLAGPTEQ QTCQSAIFTS LPILKKRKIK VYADDTQLTE HLKNHKVEYV DDIKKADVIW 360
  361 MIKHFHDYKQ LSEENPCGMI NQFPFESCIT VKDLLAACAM RDPAKNDWYQ LTYNLNTQLP 420
  421 EFVARFQNRE LNGQHNVWIV KPWNLARGMD MTVTEDLNQI IRMIETGPKI VCEYIPRPLL 480
  481 FPRPDNGNKV KFDLRYIVFL NGIAPVTAYV YNRFWIRFAI NEFSLSNFED VETHFTVFNY 540
  541 LDKEKILQMK CENFIETIEK AYPRIQWSEV QKDINLTIRK AIEAAAKEEA PRGVAPNVQS 600
  601 RAMYGVDIML QHGDNDVIKS TLLEINFMPD TTRACQYYPD FADTVFETLF LDEIDPTKVT 660
  661 PI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..209] MSA 1.01695 View MSA. No confident structure predictions are available.
    2 View Details [210..330] MSA 1.158992 View MSA. No confident structure predictions are available.
    3 View Details [331..662] FFAS03 1.11 Inositol 1,3,4-trisphosphate 5/6-kinase complexed Mg2+/ADP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle