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Protein Overview: CE01493

General Information:
Name(s) found: CE01493 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00007623 Probable U3 small nucleolar RNA-associated protein 11 status:Confirmed UniProt:Q09462 protein_id:CAA86740.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 262 amino acids

    Gene Ontology:
    Cellular Component: small-subunit processome [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    rRNA processing [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLVSISKK LSGQRQHRER SQPEARRKYG ELEKKKDYKL RAEDYQKKRD TIKKLKKSAM  60
   61 DKNQDEYHHH MVNSETWADG RHFDKKTEAE ETETQIQKKL GSLKDLEYVK FKLNEEKKKI 120
  121 DEMKGELHFA DSSLNGKGNT HTVFVDTDSE AKSFDPRVYF DTTTSMLSRQ FNRLKNEDFQ 180
  181 NKTIIGAGTK EQVRKADRVR RTRYNELIKR VERAKELQVV VDKLELKKQL AAGSKSELKP 240
  241 QKVKKAKAMR AAVYKWTYER KK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..137] MSA 9.043989 View MSA. Confident ab initio structure predictions are available.
    2 View Details [138..262] MSA 2.036995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle