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Protein Overview: CE01401

General Information:
Name(s) found: CE01401 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00020442 locus:gen-1 status:Confirmed UniProt:Q22418 protein_id:CCD65214.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 434 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [IEALink to PubMed article]
    Molecular Function: nuclease activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTINGIWEWA NHVVRKVPNE TMRDKTLSID GHIWLYESLK GCEAHHQQTP NSYLVTFFTR  60
   61 IQRLLELKII PIVVFDNINA SSSAHESKDQ NEFVPRKRRS FGDSPFTNLV DHVYKTNALL 120
  121 TELGIKVIIA PGDGEAQCAR LEDLGVTSGC ITTDFDYFLF GGKNLYRFDF TAGTSSTACL 180
  181 HDIMHLSLGR MFMEKKVSRP HLISTAILLG CDYFQRGVQN IGIVSVFDIL GEFGDDGNEE 240
  241 IDPHVILDRF ASYVREEIPA RSEDTQRKLR LRRKKYNFPV GFPNCDAVHN AITMYLRPPV 300
  301 SSEIPKIIPR AANFQQVAEI MMKECGWPAT RTQKELALSI RRKVHLTTTV AQTRIPDFFA 360
  361 ATKSKNFTPI VEPCESLEDY ISANNTWMRK RKRSESPQIL QHHAKRQVPD RKRSVKIRAF 420
  421 KPYPTDVIEL GDSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..366] PSI-BLAST 71.09691 Crystal structure of the human FEN1-PCNA complex
    2 View Details [367..434] MSA 3.263996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.074040936650541 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle