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Protein Overview: CE01335

General Information:
Name(s) found: CE01335 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00018996 PNP\/PMP oxidase status:Partially_confirmed UniProt:Q20939 protein_id:AAA21167.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 253 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyridoxine biosynthetic process [IEALink to PubMed article]
    Molecular Function: pyridoxamine-phosphate oxidase activity [IEALink to PubMed article]
    FMN binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVVPRRLSS FLSLVHEYRH LARRSYVMET PSIDIQNIRA KYLNSHDPYL LESKLPTTSP  60
   61 FELFDIWFRN VASQSDLTFE EINAVSLSTV GKDLRPSSRM VLLKAYTPTG FSFYTNYTSR 120
  121 KGNQLEENPN AAMLFYWPKV NRQIRVEGVV EKLPDEMAVA YWNSRPVASR IGSKSSDQSK 180
  181 VVPDREFLES KKVALTELSV REGAQAITKP ESWGGYHLIP RYFEFWQGQS DRLHDRIVFE 240
  241 RDVDVWLLKR LSP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..253] PSI-BLAST 71.221849 Pyridoxine 5'-phoshate oxidase (PNP oxidase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • pyridoxamine-phosphate oxidase activity
    		•  3.81533880638523 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  1.18444956617957 bayes_pls_golite062009
  • catalytic activity
    		•  0.660906721832294 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.0268904833845668 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle